KEGG   Pseudomonas psychrotolerans: BJP27_02860
Entry
BJP27_02860       CDS       T05074                                 
Name
(GenBank) DNA topoisomerase
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
ppsl  Pseudomonas psychrotolerans
Brite
KEGG Orthology (KO) [BR:ppsl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ppsl03032]
    BJP27_02860
   03400 DNA repair and recombination proteins [BR:ppsl03400]
    BJP27_02860
Enzymes [BR:ppsl01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     BJP27_02860
DNA replication proteins [BR:ppsl03032]
 Prokaryotic type
  DNA Topoisomerases
   BJP27_02860
DNA repair and recombination proteins [BR:ppsl03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      BJP27_02860
SSDB
Motif
Pfam: Topoisom_I Top1B_N_bact Integrase_DNA
Other DBs
NCBI-ProteinID: APQ10496
Position
641512..642609
AA seq 365 aa
MQRLAQTDLPVPTDERDDTGTALCTPLPPDLNYVDDRQPGLSRRKLRGKWAYFTADGERI
RDQAEVERINKLAIPPAYTDVWICPDANGHLQATGRDARGRKQYRYHPRWREIRDTDKYE
RMLAFGQALPKLRQRVEEDLNRRGLCREKVMATVISLLDATLIRVGNAQYAKSNKSYGLT
TLRNRHAEVHGSTIAFHFRGKSGVEHDVKVSDPRLARTVKKCLELPGQHLFQYVDADGER
HTVTSSDVNAYLHELTGADFTAKDYRTWAGSALALEALRELRCETQTEAKKELVDMVKAV
SRTLGNTPAVCRKCYIHPGVLDAFLAGDLGTLPRPRKRKGLKEEEVLLLNFLQRLEQRVA
ETQAA
NT seq 1098 nt   +upstreamnt  +downstreamnt
atgcaacgcctcgcccagaccgatctacccgttcccaccgatgagcgcgacgacaccggt
accgccctttgtacccccttgccacccgatctcaactacgtcgacgaccgccaacccggt
ctcagccggcgcaagctgcgcggtaaatgggcctacttcaccgcggacggcgagcgtatc
cgcgaccaggcggaggtggagcggatcaacaagctggccatcccgccggcctataccgat
gtctggatctgcccggatgccaatggccatctccaggccacgggtcgcgacgcccgtggc
cgcaagcagtatcgctaccacccgcgctggcgcgagattcgcgacaccgataagtacgag
cggatgctcgccttcggccaggctttgccgaagctgcgccagcgcgtggaggaagacctc
aatcgccgtggtctgtgccgggagaaggtcatggccacggtgatcagcctgctggatgcg
acgctgatccgggtcggcaacgcccagtacgccaagagcaacaaatcctatggcctcacc
accctgcgtaatcggcatgccgaggtgcatggcagcaccatcgccttccacttccgcggc
aagagcggtgtggaacacgatgtgaaggtgagcgatccccgcctggcacgcacggtgaag
aagtgcctggagctccccggccagcacctgttccagtacgtggatgccgacggcgagcgg
catacggtgacctcctccgacgtcaatgcctacctgcacgagctgaccggcgccgacttc
accgccaaagactaccgcacctgggcgggtagtgccctggccctggaagcgctgcgcgag
ctgcgttgcgagacccagaccgaagccaagaaggaactggtggacatggtcaaggcggtg
tcgcgcacgctgggcaacaccccggcggtttgccgcaagtgctacatccaccccggcgtg
ctcgatgcctttctcgccggggatctcggcaccctgcccagaccgcgcaaacgcaagggg
ctcaaggaggaagaggtgttgctgctcaacttcctccagcgcctggagcagcgcgtggcg
gagactcaggcggcctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

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