KEGG   Pseudomonas versuta: AOC04_03940
Entry
AOC04_03940       CDS       T04081                                 
Name
(GenBank) EvpB family type VI secretion protein
  KO
K11900  type VI secretion system protein ImpC
Organism
ppsy  Pseudomonas versuta
Pathway
ppsy02025  Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:ppsy00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02025 Biofilm formation - Pseudomonas aeruginosa
    AOC04_03940
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:ppsy02044]
    AOC04_03940
Secretion system [BR:ppsy02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   AOC04_03940
SSDB
Motif
Pfam: VipB VipB_2 GlnR_1st
Other DBs
NCBI-ProteinID: ALE87416
Position
844800..846290
AA seq 496 aa
MTATEQLQSQESQTTTLAADSFSSLLQREFKPRSEQASDALHTAVQTLAEQALGSVHLIA
DDTLSTIEALIAAIDSKLSSQVNAILHHDAFQKLESSWRGLHHLVSNTETDEKLKIRFIN
ISKAEVARELKKFKGAAWDQSPLFKKIYEHEYGQFGGEPFGALIADYYFDNSPPDVELLA
SMAKIAAAAHAPLISSADPGALLMDSWQELANPRDLGKIFQTPEHAAWRNFRSSEDSRYV
GLTLPRFLGRIPYGAKTAPVDDFNFEEVTQGDSANYLWVNAAYAMGLNINQSFKQFGWCS
QIRGIESGGAISGLPVHTYPSEDGGVDMTCPTEIAISDRRELELANNGFMPLVHCKNTSI
AAFIGAQSLHSPQQYDDPDATANARLAARLPYLFATCRFAHYLKCIVRDKIGSFKERADI
EEWLNSWIMRYVELNPATASDAAKARKPLSAAEVVVEEDQDNPGFYRAKFFLCPHYQLEG
LTVSLRLVTKLPSLKN
NT seq 1491 nt   +upstreamnt  +downstreamnt
atgactgcaactgaacagcttcaaagtcaagagagccagaccactaccctggcggcagac
agttttagcagcttgctgcaacgcgaattcaaaccccgcagcgaacaggccagtgatgca
ctgcacactgcggtgcagaccctggccgagcaggcgctgggttccgtacacctgattgcc
gatgacaccctgagcaccattgaagcgctcatcgccgccatcgacagcaaactttcaagc
caggtcaatgcgatcctgcatcatgacgcctttcaaaagcttgagtcgtcgtggcgcggt
ctgcatcacttggtgagcaacaccgagaccgatgaaaagctcaagatccgctttatcaac
atctccaaggccgaagtggcccgtgaactgaagaagttcaaaggcgctgcctgggaccag
agcccgctgttcaagaagatttatgagcatgaatacgggcagtttggcggtgagcccttc
ggtgcattgatcgccgactattacttcgataacagcccgcccgatgtcgagctgctggcc
tccatggccaagatcgccgcggcggcccatgcgccgttaatcagttctgctgaccctggc
gccctgttgatggactcctggcaagagctggccaacccgcgcgacctgggcaaaatcttc
cagaccccggagcatgctgcctggcgcaacttccgtagctccgaagactcgcgctacgtg
ggcctgaccttgccgcgcttcctcggtcgcatcccctacggcgccaaaaccgcaccggtg
gacgacttcaactttgaagaagtgacccagggtgattcggctaactacctgtgggtcaat
gccgcctatgccatgggcctgaatatcaatcagtccttcaagcagttcggctggtgttca
cagatccgtggcatcgagtccggcggcgcaatcagtggcctgccggtgcacacttaccca
agtgaagacggcggggtggatatgacctgcccgaccgaaatcgccatcagcgaccgccgt
gaacttgaactggccaataacggttttatgccgctggtgcattgcaagaacacctccatt
gccgcctttatcggcgcgcagtccttgcacagcccgcagcaatacgacgacccggatgcc
acggccaatgcccgactggccgcacgcctgccttacttgttcgcgacttgccgttttgcc
cactatttgaaatgcatcgtgcgtgacaagatcggctcgttcaaggaacgtgcggatata
gaagagtggctcaatagctggatcatgcggtatgtagagctgaatccggccactgcgtcg
gacgcagccaaagcccgtaaacccttgtctgctgctgaagtggtggttgaagaagatcaa
gataatccgggcttttaccgggctaagtttttcttgtgcccacattatcagttggaaggc
ttgacggtttcattgcgattggtaacgaagttgccatctttgaaaaactag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (10)   

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