KEGG   Pseudomonas versuta: AOC04_20480
Entry
AOC04_20480       CDS       T04081                                 
Name
(GenBank) diaminopimelate decarboxylase
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
ppsy  Pseudomonas versuta
Pathway
ppsy00300  Lysine biosynthesis
ppsy00470  D-Amino acid metabolism
ppsy01100  Metabolic pathways
ppsy01110  Biosynthesis of secondary metabolites
ppsy01120  Microbial metabolism in diverse environments
ppsy01230  Biosynthesis of amino acids
Module
ppsy_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:ppsy00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    AOC04_20480
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    AOC04_20480
Enzymes [BR:ppsy01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     AOC04_20480
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC Ala_racemase_N
Other DBs
NCBI-ProteinID: ALE90415
Position
4585546..4586793
AA seq 415 aa
MDAFNYRDGELFAEGVALTAIAERFGTPTYVYSRAHIEAQYNAFADALDGMPHLVCFAVK
ANSNLGVLNVLARLGAGFDIVSRGELERVLAAGGSADKIVFSGVGKTRDDMRRALEVGVH
CFNVESTDELERLQVVAAELGVRAPISLRVNPDVDAGTHPYISTGLKENKFGIAIADAED
VYIRAAQLPNLEVVGVDCHIGSQLTTLEPFIDALDRLLALVDRLGDCGIYLRHIDLGGGL
GVRYRDEEPPLAGDYIKAVRERIDGRDLALVFEPGRFIVANAGVLLTQVEYLKHTEHKDF
AIVDAAMNDLIRPALYQAWMDVTAVRPRDTQARAYDIVGPICETGDFLAKDRQLALAEGD
LLAVHSAGAYGFVMSSNYNTRGRAAEILVDGDQAFEVRRRETVAELFAGESLLPE
NT seq 1248 nt   +upstreamnt  +downstreamnt
atggacgcttttaactatcgggacggcgagctgttcgccgaaggtgttgcgctgacggcc
attgccgagcgctttggcactccgacctacgtttattcccgggcgcacatcgaggcgcaa
tacaacgcttttgccgatgcactggacggcatgccgcacctggtgtgcttcgcggtcaag
gccaactccaacctgggtgtgctcaatgtcctggcgcgtctgggcgccggtttcgacatc
gtgtcccgtggtgagcttgagcgtgtactggccgctggcggctcggcagacaagatcgtg
ttttccggtgtcggcaagacccgcgacgacatgcgtcgcgccctggaagtgggcgttcac
tgtttcaacgtcgaatccaccgacgagctggagcgcctgcaagtggtggccgccgagctg
ggcgttcgtgcgccgatttcgctgcgggtcaacccggacgtcgatgcgggcacccacccg
tatatctccacgggcctcaaggaaaacaagttcggcatcgccattgccgatgccgaagat
gtgtacatccgtgccgcccagttgccgaacctcgaagtggtgggtgtcgattgccatatc
ggttcgcaactgaccaccctcgaacctttcatcgatgccctcgaccgcctgctggcgctg
gttgatcgcctgggcgattgcggcatctatctgcgtcacatcgacctcggtggtggcctg
ggcgtgcgttaccgcgatgaagagccgccgctggccggtgattacatcaaggccgtgcgc
gagcgcatcgacggtcgtgatctggcgctggtatttgagccgggccggttcattgtggcc
aacgcgggcgtgctcttgactcaggttgagtacctcaagcacaccgagcacaaagacttt
gccatcgtcgatgcggccatgaacgacctgattcgcccggcgctgtaccaggcctggatg
gacgtgacagcggttcgcccgcgtgacactcaggcccgtgcttacgacatcgtggggccg
atctgcgaaaccggcgacttcctggccaaagatcgccagctggcgttggccgagggtgat
ttgctggcggtgcattcagccggcgcatatggttttgtaatgagctcgaactacaacacc
cgtggtcgcgccgccgagattctggtggatggtgatcaggcgtttgaagttcgccgccgc
gagactgtagccgagttgtttgccggcgaaagcctgctgccggagtaa

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