KEGG   Pseudomonas putida S16: PPS_1056
Entry
PPS_1056          CDS       T01570                                 
Name
(GenBank) exodeoxyribonuclease VII, large subunit
  KO
K03601  exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
Organism
ppt  Pseudomonas putida S16
Pathway
ppt03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:ppt00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    PPS_1056
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ppt03400]
    PPS_1056
Enzymes [BR:ppt01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.6  exodeoxyribonuclease VII
     PPS_1056
DNA repair and recombination proteins [BR:ppt03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA exonucleases
     PPS_1056
SSDB
Motif
Pfam: Exonuc_VII_L tRNA_anti_2 tRNA_anti-codon
Other DBs
NCBI-ProteinID: AEJ11631
UniProt: F8FYG8
Position
complement(1175900..1177291)
AA seq 463 aa
MMPAMIRDPFERLGLDREVLTVSQLNGRARVLLEDVFRSVWVEGEISNLARPASGHMYFT
LKDSGAQVRCALFRQNATRVRQALRDGLAVRVRGKVSLFEGRGDYQLILDTVEPAGDGAL
RLAFEALKEKLGAEGLFSAERKQPLPAHPQRIGIITSPTGAVIRDIISVFGRRAPQVELN
LIPTAVQGREATAQIVRAIRLADSLGFDALILARGGGSLEDLWCFNEEAVARAVAACVTP
IVSAVGHETDVSISDFVADVRAPTPSAAAELLAPDNSGLQQRLDGLQRRLLLRIQNRLTH
DRLRLESLTRRLRHPGERLRQQAQRLDDLDMRLRRAFMLNLNQRHERLARLDTRLAAQHP
GRTLKLLGQRLDSLAERLPRAMREVLKDRRQRFQAQLQTLQVVSPLATLARGYSILLDEQ
GQAIRSAEQTRNGQRLTARLNEGELLVRVEDNHLTPVTLSLLD
NT seq 1392 nt   +upstreamnt  +downstreamnt
atgatgcccgccatgatcagagaccctttcgaacgactcggcctggaccgcgaggtcctt
accgtcagccaactcaacggccgcgcccgcgtgctgctggaagacgtgttccgcagcgtg
tgggtggaaggcgagatttccaacctcgcccgcccggcgtccggccacatgtacttcacc
ctcaaggacagcggcgcacaggtacgctgcgcgctgttccggcagaacgccacgcgggtg
cgccaggccctgcgcgacggtctggcggtgcgggtacgcggcaaggtttcgctgttcgaa
gggcgtggcgattaccagctgattctcgacaccgtcgagccggccggtgatggcgccttg
cgcctggccttcgaggcattgaaagagaagctcggtgccgaggggctgttcagcgccgaa
cgcaagcagccgctgccggcccacccgcagcgcatcggcatcattacgtcgcccaccggc
gcagtgatccgcgacatcatcagtgtgttcggtcgccgcgccccgcaagtggaactgaac
ctgatccccaccgcagtacagggccgcgaagccactgcacagatcgtgcgcgcgatccgc
ctggccgatagcctggggttcgatgcgctgatcctggcccggggcggcggctcgcttgaa
gacttgtggtgcttcaacgaagaagccgtggcgcgggccgtggccgcttgtgtcacgccg
attgtcagcgccgtgggccatgagaccgatgtctcgatcagcgactttgtcgccgacgtg
cgcgcgcccacaccctctgccgctgccgagctgctggcccccgacaacagtggcctgcag
caacgtctggatggcctgcaacggcgcctgctgctgcgcattcagaaccgcctgacccac
gaccgcctgcgcctggagtcgctgacccggcgcctgcgccacccgggcgagcgcctgcgc
cagcaggcccaacgcctggacgacctggacatgcgcttgcgccgcgcgttcatgctcaac
ctcaaccagcgacacgagcgcctggcacgcctggacacccgcctcgccgcgcagcacccg
gggcgaaccctgaaactgctgggccaacgcctggacagcctggccgagcgcctgccacgg
gccatgcgcgaggtgctcaaggaccgccgccagcgcttccaggcccagttgcagacgctg
caggtggtcagcccgctggccaccctcgcccgcggctacagcatcctgctggacgaacag
ggccaggccatccgcagcgccgaacagacccgaaatggccagcgcctgaccgcccgcctg
aacgaaggcgagctgttggtgcgggtcgaagacaaccacctgaccccggtcaccctctca
cttctggactga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (13)   

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