KEGG   Pseudomonas putida S16: PPS_3842
Entry
PPS_3842          CDS       T01570                                 
Name
(GenBank) RNA-binding S4 domain-containing protein
  KO
K06178  23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
Organism
ppt  Pseudomonas putida S16
Brite
KEGG Orthology (KO) [BR:ppt00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ppt03009]
    PPS_3842
Enzymes [BR:ppt01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.22  23S rRNA pseudouridine2605 synthase
     PPS_3842
Ribosome biogenesis [BR:ppt03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    PPS_3842
SSDB
Motif
Pfam: PseudoU_synth_2 S4
Other DBs
NCBI-ProteinID: AEJ14383
UniProt: F8FWL8
Position
complement(4337502..4338569)
AA seq 355 aa
MSEQDLQDTEITPPSGEKLQKVLARIGVGSRRDVEAWISQGRIKVNGVEATLGQRVDLHD
AIAVDGKLIKREEAAEATRRVIMYNKPDGEICTRDDPEGRPTVFDRLPRPKEGRWINIGR
LDINTTGLLLFTTDGELANRLMHPSYEMDREYAVRVRGEVDDEMIERLKAGVMLEDGPAK
FTDIQKAPGGEGFNHWYHCVVMEGRNREVRRLWESQGMVVSRLKRVRFGPVFLNSDLPMG
RWREMTQGEIDILAAEVGLQPVALPAMKLKAKDKMERLQRKSTRPLGRGERVRSLRPAHE
GAAAGERPARQAREEAPRKTGRGSTVAERPSEMRKRPAKPEGDKPAGRGRGKPRG
NT seq 1068 nt   +upstreamnt  +downstreamnt
atgagtgagcaagacctgcaagataccgagatcacccctccatccggcgaaaagctgcag
aaagtgctggcgcgcattggcgttggctcgcgccgtgacgtcgaggcctggatcagccag
ggccgcatcaaggtcaacggcgtcgaggccaccctcggccagcgcgtcgacctgcacgac
gccattgccgtggatggcaagctgatcaagcgcgaagaggccgccgaggccacccgccgg
gtgatcatgtacaacaagcccgatggcgagatctgcacccgtgacgacccggaaggccgc
ccgaccgtgttcgaccgcctgccacggccgaaagaaggccgctggatcaacatcggccgc
ctcgacatcaacaccaccggcctgctgctgttcaccaccgacggtgaactggccaaccgc
ctgatgcacccgtcctacgagatggaccgtgagtacgcggtacgtgtgcgtggtgaggtc
gacgacgagatgatcgagcgcctgaaggccggcgtgatgctggaagatggcccggccaag
ttcaccgacatccagaaggcgcccggtggtgaaggcttcaaccactggtaccactgcgtg
gtgatggaaggccgtaaccgtgaagtgcgtcgcctgtgggagtcccagggcatggtggtc
agccgcctgaagcgcgtgcgtttcggcccggtgttcctcaactccgacctgccgatgggc
cgctggcgtgaaatgacccagggcgaaatcgacatcctcgccgcagaggtaggcctgcag
ccggtggcgctgccagccatgaagctcaaggccaaggacaagatggagcgcctgcagcgc
aaatcgacccgcccgctgggccgtggcgagcgcgtgcgcagcctgcgcccggcccacgaa
ggtgctgctgccggcgaacgcccggcgcgccaggcgcgtgaagaggccccgcgcaagacc
ggccgtggcagcaccgtggccgaacgcccgagcgagatgcgcaagcgtccggccaagcct
gaaggtgacaagccggcaggccgtggccgcggcaaaccgcgtggctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

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