KEGG   Pseudomonas putida S16: PPS_4354
Entry
PPS_4354          CDS       T01570                                 
Name
(GenBank) D-alanine-D-alanine ligase
  KO
K01921  D-alanine-D-alanine ligase [EC:6.3.2.4]
Organism
ppt  Pseudomonas putida S16
Pathway
ppt00470  D-Amino acid metabolism
ppt00550  Peptidoglycan biosynthesis
ppt01100  Metabolic pathways
ppt01502  Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:ppt00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    PPS_4354
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    PPS_4354
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01502 Vancomycin resistance
    PPS_4354
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:ppt01011]
    PPS_4354
Enzymes [BR:ppt01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.4  D-alanine---D-alanine ligase
     PPS_4354
Peptidoglycan biosynthesis and degradation proteins [BR:ppt01011]
 Precursor biosynthesis
  Amino acid ligase
   PPS_4354
SSDB
Motif
Pfam: Dala_Dala_lig_C Dala_Dala_lig_N CPSase_L_D2 ATP-grasp_4 ATP-grasp ATP-grasp_3 RimK ATPgrasp_YheCD ATP-grasp_5 GARS_A TTL ATPgrasp_Ter
Other DBs
NCBI-ProteinID: AEJ14887
UniProt: F8G578
Position
complement(4931643..4932599)
AA seq 318 aa
MTSAYDKLHSTLDVKAFGRVAVLYGGKSAEREVSLKSGAAVIDALTTAGVDVVAIDVGDD
LLDRLQSEKIDRAFIILHGRGGEDGSMQGLLECLGIPYTGSGILASALAMDKLRTKQVWQ
SLGIPTPRHAVLASESDCLQASTELGFPLIVKPAHEGSSIGMAKVNSAQELVAAWQDAAK
YDSQVLVEQWIHGPEFTVAVLRGQVLPPIALGTPHVFYDYDAKYIANDTQYRIPCGLDSV
KEQELINLTARACDAIGIEGWGRLDVMQDEQGRFWLLEVNTAPGMTDHSLVPMAARAAGL
DFQQLVLAILAESVATRG
NT seq 957 nt   +upstreamnt  +downstreamnt
atgaccagcgcctacgacaaactgcactcgaccctggacgtcaaggcgttcggccgcgtc
gcggtgctgtacggcggcaagagcgccgagcgcgaagtgtcgctcaagtccggcgccgca
gtgatcgacgcgctgaccaccgccggtgtcgacgtggtcgccatcgacgtgggggacgac
ctgctcgaccgcctgcaaagcgagaagatcgaccgcgccttcatcattctccacggtcgt
ggcggtgaagacggcagcatgcaaggcctgctcgagtgcctgggcattccctataccggc
agtggcatccttgcttcggcactggccatggacaagctgcgcaccaagcaggtgtggcag
agcctgggcattccgactccgcgccacgcagtgctggcgagcgaaagcgattgtttgcag
gccagtacggaactgggcttcccgcttatcgtcaaacccgcccatgaaggttccagcatc
ggcatggccaaggtgaacagcgcccaggaactggtcgccgcctggcaggacgcagctaaa
tacgattcccaggtactggtggagcagtggatccacgggccggagttcaccgtcgcggta
ttgcgcggccaggtgctgccgccgatcgccctgggtacgccgcacgtgttctacgactac
gacgccaagtacatcgccaacgatacccagtaccgcattccgtgcggcctggacagcgtc
aaggaacaggaactgatcaacctgaccgcgcgtgcctgcgatgccatcggcatcgaaggc
tgggggcggctggacgtgatgcaggacgagcagggccggttctggctgctcgaagtcaac
accgcacccggcatgactgaccatagcctggtgcccatggcggcccgcgcggccggcctg
gacttccagcaactggtgctggcaatcctggccgagagcgtggcgacgcgaggttaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (12)   
   Pfam (12)   
All databases (31)   

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