KEGG   Pseudomonas putida S16: PPS_4663
Entry
PPS_4663          CDS       T01570                                 
Name
(GenBank) DNA-binding protein Fis
  KO
K03557  Fis family transcriptional regulator, factor for inversion stimulation protein
Organism
ppt  Pseudomonas putida S16
Brite
KEGG Orthology (KO) [BR:ppt00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ppt03000]
    PPS_4663
   03036 Chromosome and associated proteins [BR:ppt03036]
    PPS_4663
   03400 DNA repair and recombination proteins [BR:ppt03400]
    PPS_4663
Transcription factors [BR:ppt03000]
 Prokaryotic type
  Helix-turn-helix
   Other families
    PPS_4663
Chromosome and associated proteins [BR:ppt03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    PPS_4663
DNA repair and recombination proteins [BR:ppt03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Facilitator
      PPS_4663
SSDB
Motif
Pfam: HTH_8 UPF0175
Other DBs
NCBI-ProteinID: AEJ15194
UniProt: F8FSR6
Position
5275089..5275367
AA seq 92 aa
MSDNANLKQHLNTPSEEGQTLRDSVEKALHNYFAHLEGATVTDVYNLVLSEVEAPLLESV
MNYVKGNQTKASEMLGLNRGTLRKKLKQYDLL
NT seq 279 nt   +upstreamnt  +downstreamnt
gtgagcgacaacgccaacctgaaacagcacctcaacacgccgagcgaagagggccagacc
cttcgcgacagcgtagagaaggcgctgcacaactacttcgcccacctggaaggcgcgacc
gtgacggacgtgtacaacctggtgctctccgaagtcgaggcgcccctgctcgaaagcgtg
atgaactacgtgaagggcaaccagaccaaggccagcgagatgctcggactgaaccgaggc
accctgcgcaagaagctcaagcagtacgacttgttgtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

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