KEGG   Pseudomonas putida KT2440: PP_0514
Entry
PP_0514           CDS       T00114                                 
Symbol
ribD
Name
(GenBank) bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
ppu  Pseudomonas putida KT2440
Pathway
ppu00740  Riboflavin metabolism
ppu01100  Metabolic pathways
ppu01110  Biosynthesis of secondary metabolites
ppu01240  Biosynthesis of cofactors
ppu02024  Quorum sensing
Module
ppu_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:ppu00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    PP_0514 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    PP_0514 (ribD)
Enzymes [BR:ppu01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     PP_0514 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     PP_0514 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam Inv-AAD
Other DBs
NCBI-ProteinID: AAN66141
UniProt: Q88QH9
Position
600650..601786
AA seq 378 aa
MNMPSQAAILDAHYMARALELARKGLYTTHPNPRVGCVIVRDGEVVGEGWHVRAGEPHAE
VHALRQAGELARGACAYVTLEPCSHHGRTPPCAEALVKAGVARVVAAMQDPNPQVAGQGL
RRLAEAGIEVASGVLEAEARALNPGFLKRMEHGLPFVRAKLAMSLDGRTAMASGESQWIT
GPAARSAVQRLRARSSVVLTSAASVLADNARMTVRGAELGLDAETTALALSRTPLRVLVD
GRLRLPLAAPFFQAGPALVVTAVADDPRYAAAGHELLSLPGDNGQVDLGALLHALAARGV
NEILLEAGAGLVGAFARQGLVDEYQLFVAGTFLGSQARPLLDWPMDKMSEAPRLKITEMR
AVGDDWRVTAIPLPAPGV
NT seq 1137 nt   +upstreamnt  +downstreamnt
gtgaacatgcccagccaagccgccatccttgacgcccactacatggcccgtgcgctggag
ctggcgcgtaaaggcctgtacaccacccacccgaacccgcgcgtaggctgcgtgatcgtg
cgtgatggcgaagtggttggcgaaggctggcacgttcgcgccggcgagccccatgccgaa
gtgcatgccctgcgtcaggccggtgaacttgcccgaggtgcttgtgcctatgtcaccctg
gaaccatgcagccaccatggccgtacgccgccgtgtgccgaagcgctggtcaaggccggt
gtggcgcgtgtagtcgcagccatgcaggaccctaacccgcaagtggcgggacagggcctg
cggcgcctggccgaagccggaatcgaagtggccagcggggtgctcgaagccgaggcccgc
gccctcaacccaggcttcctcaagcgtatggagcacggcctgccgttcgttcgcgccaag
ctggccatgagcctggacggccgcaccgccatggccagtggtgaaagccagtggatcacc
ggcccggccgcccgctcagccgtgcagcgcttgcgcgcccgctccagcgtggtgctgacc
agcgccgccagcgtgctggcagacaacgcacgcatgaccgtgcgtggtgccgagctgggc
ctggatgccgaaactactgccctggctcttagccgcacacccttgcgggtgctggtcgat
ggccgtctgcgcctgcccctggcggcgccgttcttccaggccggcccggctctggtggtg
actgctgtcgcagatgacccgcgctatgccgctgccggccacgaattgctcagcttgccg
ggcgacaatggccaggtcgacctgggggcgctgcttcacgctctggccgcccgcggcgtc
aacgaaatcctgctggaagccggtgccggcctggtcggtgccttcgcacggcaaggcctg
gtcgacgaataccagctgttcgtcgctggcaccttcctcggctcccaggcccggccgcta
ctggactggccgatggacaagatgagcgaagcaccacggctgaaaattaccgaaatgcgc
gcagtgggcgatgactggcgggtcacggccatccccctgccagcgcccggcgtataa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (6)   
   KEGG PATHWAY (5)   
   KEGG MODULE (1)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (4)   
   KEGG ENZYME (2)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (29)   

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