KEGG   Pseudomonas putida KT2440: PP_0957
Entry
PP_0957           CDS       T00114                                 
Symbol
kdsD
Name
(GenBank) D-arabinose 5-phosphate isomerase
  KO
K06041  arabinose-5-phosphate isomerase [EC:5.3.1.13]
Organism
ppu  Pseudomonas putida KT2440
Pathway
ppu00540  Lipopolysaccharide biosynthesis
ppu01100  Metabolic pathways
ppu01250  Biosynthesis of nucleotide sugars
Module
ppu_M00063  CMP-KDO biosynthesis
Brite
KEGG Orthology (KO) [BR:ppu00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00540 Lipopolysaccharide biosynthesis
    PP_0957 (kdsD)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01005 Lipopolysaccharide biosynthesis proteins [BR:ppu01005]
    PP_0957 (kdsD)
Enzymes [BR:ppu01000]
 5. Isomerases
  5.3  Intramolecular oxidoreductases
   5.3.1  Interconverting aldoses and ketoses, and related compounds
    5.3.1.13  arabinose-5-phosphate isomerase
     PP_0957 (kdsD)
Lipopolysaccharide biosynthesis proteins [BR:ppu01005]
 Lipid A
  PP_0957 (kdsD)
SSDB
Motif
Pfam: SIS CBS SIS_2 CoA_binding_2
Other DBs
NCBI-ProteinID: AAN66582
UniProt: Q88P95
Position
complement(1098591..1099565)
AA seq 324 aa
MSQSSELIQSAQRTLRLELEAVEALLARIDDNFVKACELILASKGRVVVVGMGKSGHIGN
KIAATLASTGTPAFFVHPAEASHGDMGMITRDDVILALSNSGSTAEIVTLLPFIKRLGIK
LISLTGNPDSPLAQAAEVNLDARVEQEACPLNLAPTSSTTAALVLGDALAIALLEARGFT
AEDFAFSHPGGALGRRLLLKVENVMHAGDDLPQVPRGTLLKDALLEMSHKGLGMTVIVEA
DGKLAGIFTDGDLRRSLDRNIDVHTTLIDQVMTVHGKTARADMLAAEALKIMEDHKINAL
VVVDREDRPTGALNMHDLLRAGVM
NT seq 975 nt   +upstreamnt  +downstreamnt
atgagccaatccagcgagctgatccaatccgcccaacgcactctgcgcctggaactcgag
gccgtagaggcccttttggcgcgcatcgacgacaatttcgtcaaagcctgcgaactgatt
ctggccagcaagggccgggtcgtcgtggtcggcatgggcaagtccgggcacatcggcaac
aagatcgccgcgaccctggccagcaccggcacaccggcgtttttcgtgcatccggccgaa
gccagccatggcgacatgggcatgatcacccgtgatgatgtcatccttgcgctgtcgaac
tccggcagcaccgccgaaatcgtcaccctgctgccgttcatcaagcgccttggcatcaag
ctgatcagcctgaccggcaacccggactcgccgctggcccaggccgccgaggtcaacctt
gacgcacgtgtcgaacaagaggcctgcccgctgaacctggcccccacctcctccaccacg
gcagcgctggtactgggcgacgccttggccatcgccttgctcgaagcccgcggcttcacc
gccgaggacttcgccttctcgcacccgggaggcgcgctgggccgccgcctgctgctgaag
gtcgagaacgtgatgcacgccggcgacgacctgcctcaagtaccacgcggcaccctgctc
aaggacgcgctgctggaaatgtcccacaaaggtttgggcatgaccgtgatcgtcgaagcc
gatggcaaactggccgggatcttcaccgacggtgacctgcgccgcagcctggaccgcaat
atcgatgtgcacaccaccctgatcgaccaggtcatgaccgttcatggcaagactgcgcgt
gccgacatgctcgccgccgaagccctgaagataatggaagaccacaagatcaacgccctg
gtggtggtggaccgtgaagaccgcccgaccggcgccctgaacatgcatgacctgctgcgc
gccggcgtaatgtaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (4)   
   KEGG PATHWAY (3)   
   KEGG MODULE (1)   
Chemical substance (2)   
   KEGG COMPOUND (2)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (20)   

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