KEGG   Pseudomonas putida KT2440: PP_2080
Entry
PP_2080           CDS       T00114                                 
Symbol
gdhB
Name
(GenBank) NAD-specific glutamate dehydrogenase
  KO
K15371  glutamate dehydrogenase [EC:1.4.1.2]
Organism
ppu  Pseudomonas putida KT2440
Pathway
ppu00220  Arginine biosynthesis
ppu00250  Alanine, aspartate and glutamate metabolism
ppu00430  Taurine and hypotaurine metabolism
ppu00910  Nitrogen metabolism
ppu01100  Metabolic pathways
ppu01120  Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:ppu00001]
 09100 Metabolism
  09102 Energy metabolism
   00910 Nitrogen metabolism
    PP_2080 (gdhB)
  09105 Amino acid metabolism
   00250 Alanine, aspartate and glutamate metabolism
    PP_2080 (gdhB)
   00220 Arginine biosynthesis
    PP_2080 (gdhB)
  09106 Metabolism of other amino acids
   00430 Taurine and hypotaurine metabolism
    PP_2080 (gdhB)
Enzymes [BR:ppu01000]
 1. Oxidoreductases
  1.4  Acting on the CH-NH2 group of donors
   1.4.1  With NAD+ or NADP+ as acceptor
    1.4.1.2  glutamate dehydrogenase
     PP_2080 (gdhB)
SSDB
Motif
Pfam: Bac_GDH_CD GDH_C GDH_ACT1 GDH_ACT2 GDH_HM3 GDH_ACT3 GDH_HM1 GDH_HM2 ELFV_dehydrog PAS_3 DUF948
Other DBs
NCBI-ProteinID: AAN67694
UniProt: Q88L55
Position
2367183..2372048
AA seq 1621 aa
MAFFTAASKADFQHQLQAALAQHISEQSLPQVALFAEQFFGIISLDELTQRRLSDLAGCT
LSAWRIIERFDPEYPQVRVYNPDYERNGWQSTHTVVEVLHHDLPFLVDSVRTELNRRGYS
IHTLQTTVLSVRRGAKGELLELLPKGTQGEGVRYESLMYLEIDRCANAAELTVLTREIEQ
VLAEVRVVVADFEPMKAKLREVVAQVEQTAFGPAQNEKGEVKAFLEWLLDNHFTFLGYEE
FTVKGDADGGQMVYDEQSFLGLPRRLRVGLTAEELRIEDYAVAYLNEPLLLSFAKAALPS
RVHRPAYPDYVSIRQLDADGKVIKEHRFMGLYTSSVYGESVHAIPYIRVKVAEVERRSGF
DPKAHLGKELAQVLEVLPRDDLFQTPIDELFSTVMAIVQIQERNKIRVFLRKDPYGRFCY
CLAYVPREIYSTEVRQKIQQVLMERLKASDCEFWTFFSESVLARVQLILRVDPKNRIDID
PQQLEREVIQACRSWHDDYSALVVENFGEAQGTNILADFPKGFPAGYRERFAAHSAVVDL
QHVLNLSESKPLAMSFYQPLTQVGERILHCKLYHADTPLALSDVLPILENLGLRVLGEFP
YRLRHANGREYWIHDFAFTYSEGLSLDIQQLNDTLQDAFIHIVRGDAENDAFNRLVLTAG
LPWRDVALLRAYARYLKQIRLGFDLGYIASTLNNHTDIARELTRLFKTRFYLARKLTQDD
LDDKQQRLEQAILSALDDVQVLNEDRILRRYLDLIKATLRTNFYQPDANGQNKSYFSFKF
NPKLIPELPKPVPKFEIFVYSPRVEGVHLRFGNVARGGLRWSDREEDFRTEVLGLVKAQQ
VKNSVIVPVGAKGGFLPRRLPLGGSRDEIAAEGVACYRIFISGLLDITDNLKDGGVVPPA
NVVRHDDDDPYLVVAADKGTATFSDIANGIAIDYGFWLGDAFASGGSAGYDHKKMGITAR
GAWVGVQRHFRERGINVQEDPITVIGVGDMAGDVFGNGLLMSDKLQLVAAFNHLHIFIDP
NPDPATSFAERKRLFDLPRSAWSDYDTSIMSEGGGIFPRSAKSIAISPQMKERFAIEADR
LTPTELLNALLKAPVDLLWNGGIGTYVKASTESHADVGDKANDALRVNGNELRCKVVGEG
GNLGMTQLGRVEFGLNGGATNTDFIDNAGGVDCSDHEVNIKILLNEVVQGGDMTEKQRNQ
LLGSMTDEVAGLVLGNNYKQTQALSLAARRARERIAEYKRLMADLEARGKLDRAIEFLPS
EEQLAERLAAGQGLTRAELSVLISYSKIDLKEQLLKSLVPDDDYLTRDMETAFPPSLVSK
FAEAMRRHRLKREIVSTQIANDLVNNMGITFVQRLKESTGMSPANVAGAYVIVRDIFHLP
HWFRQIEALDYQVPAEIQLTLMDELMRLGRRATRWFLRSRRNEQDAGRDTAHFGPKIAQL
GLKLDELLEGPTRERWMVRYQGFVDAGVPELLARMVAGTSHLYTLLPIIEAADVTGHEPA
QVAKAFFAVGSALDLTWYLQEISNLPVENNWQALAREAFRDDIDLQQRAITISVLQMADA
PQDMDARVALWSEQHRGMVERWRAMLDDLRNATGTDYAMYAVANRELVDLAMSGQAAVVP
S
NT seq 4866 nt   +upstreamnt  +downstreamnt
atggcgttcttcaccgcagccagcaaagccgacttccagcatcaactgcaagcggccctg
gcgcagcacatcagcgaacagtccctgccacaagtggcgctgttcgccgagcagttcttc
ggcatcatctctctggacgaactcacccagcgcaggctttccgacctggccggctgcacc
ctgtcagcctggcgcatcatcgagcgtttcgaccccgaatacccgcaagtgcgggtgtac
aaccctgattacgaacgcaatggctggcagtcgacccataccgtggtcgaagtgctgcac
catgacctgccgttcctggtcgactcggtgcgcaccgagctcaaccgccgtggctacagc
atccacaccctgcaaaccaccgtgctcagcgtgcgccgtggcgccaagggcgagctgttg
gagctgctgcccaagggaacccagggcgaaggcgtgcgctacgagtcactgatgtacctg
gagatcgaccgctgcgccaatgccgccgagctgacagtgctgacccgcgagatcgagcag
gtgctggccgaggtacgggtggtggtggccgacttcgaaccgatgaaggccaagctgcgt
gaagtggtagcgcaggtggagcaaaccgcctttggccccgcccaaaacgagaaaggcgaa
gtcaaggccttcctcgaatggctgctggataaccacttcaccttcctgggctatgaagaa
ttcaccgtcaagggcgacgccgatggcggccagatggtctacgacgagcagtcgttcctc
ggcctgccgcgccgtctgcgcgtgggcctgaccgcagaagagctgcgcatcgaagactac
gctgtggcctacctcaacgagccgctgctgctgtcgttcgccaaggccgcactgcccagc
cgcgtgcaccgcccggcctacccggactacgtgtcgatccgccagctggacgccgacggc
aaggtcatcaaggagcaccgcttcatggggctgtacacctcgtcggtgtatggcgaaagc
gtgcatgccattccgtacatccgcgtgaaggtggccgaagtcgagcgccgttcgggcttt
gatcccaaggcccacctgggcaaggaactggcccaggtgctggaagtgctgccgcgcgac
gacctgttccagacgccgatcgacgagctgttcagcacggtcatggcaatcgtgcagatc
caggagcgcaacaagatccgcgtgttcctgcgtaaagacccgtatggccgcttctgctac
tgcctggcctacgtcccgcgtgaaatctattccaccgaagtacggcagaagatccagcag
gtgctgatggagcgcctgaaggccagcgactgcgagttctggaccttcttctccgaatcg
gtactggcccgtgtgcaactgatcctgcgggtcgaccccaagaaccgtatcgacatcgac
ccgcagcagctggaacgcgaagtcatccaggcctgccgctcgtggcatgacgactactcg
gcactggtggtggagaacttcggcgaagcccagggcaccaacatcctcgccgatttcccc
aaaggcttcccggccggttaccgcgagcgcttcgccgcgcactcggcggtggtcgacctg
cagcatgtgctgaacctgtcggaaagcaagccgctggccatgagcttctaccagccgttg
acccaggtgggcgagcgcatcctgcactgcaagctgtaccacgccgacaccccgctggcg
ctgtccgacgtgctgccgattctggaaaacctcggcctgcgcgtgctcggcgagttcccg
taccgcctgcgccatgccaatggccgcgaatactggatccacgacttcgccttcacctac
agcgaaggcctgagcctggacatccagcagctcaacgacaccctgcaggacgccttcatc
cacatcgtccgtggtgacgccgagaacgacgctttcaaccgcctggtgctcaccgccggc
ttgccgtggcgcgacgtggccttgctgcgtgcctacgcccgttacctgaaacagatccgt
ctgggcttcgatctgggctatatcgccagcaccctgaacaaccacaccgacatcgcccgt
gagctgacccggttgttcaagacccgcttctacctggcgcgcaagcttacccaggacgac
cttgacgacaagcagcagcgcctggaacaggccatcctgagcgccctggatgacgtgcag
gtgctcaacgaagaccgcatcctgcggcgctacctggacttgatcaaggccaccctgcgt
accaacttctaccagcccgacgccaacggccagaacaagtcgtacttcagcttcaagttc
aaccccaagctgatccccgaactgcccaaaccggtgccaaagttcgagatattcgtctat
tcgccgcgcgtcgagggcgtgcacctgcgctttggcaacgttgcccgtggtggcctgcgc
tggtccgaccgcgaagaggacttccgtaccgaagtgctggggctggtgaaagcccagcag
gtgaagaactcggtcatcgtgccggtcggcgccaagggtggtttcctgccgcgtcgcctg
ccgctgggcggcagccgtgacgagatcgccgccgaaggcgtggcgtgctaccgcatcttc
atttccggcctgctcgacatcaccgacaacctcaaggacggtggcgtggtgccgccggcc
aacgtggtgcgtcatgacgatgacgacccgtacctggtggtagcggccgacaaaggcacc
gcgaccttctccgacatcgccaacggcattgccatcgactacggcttctggcttggcgat
gcctttgcctcgggcggctcggccggttacgaccacaagaagatgggcattaccgcgcgc
ggcgcctgggtgggcgtgcagcgtcacttccgcgagcgtggcatcaacgtgcaggaagac
ccgatcaccgtcattggtgtgggcgatatggccggcgacgtgttcggcaatggcctgctg
atgtccgacaagctgcaactggtggctgcgttcaaccacctgcatatcttcatcgacccc
aaccccgaccctgccaccagctttgccgagcgcaagcgcctgttcgacctgccgcgttcg
gcctggagcgactacgacaccagcatcatgtccgaaggcggcgggatcttcccgcgcagt
gccaagagcatcgccatcagcccgcagatgaaagagcgcttcgccatcgaagccgaccgc
ctgaccccgaccgagctgctgaacgcgctgctcaaggccccggtggacctgctgtggaac
ggcggcatcggtacctacgtgaaggccagcactgaaagccacgccgatgtcggcgacaag
gccaacgatgcgctgcgggtcaacggtaacgaactgcgctgcaaggtagtgggcgagggc
ggcaacctgggcatgacccagctcggccgcgtcgagttcggcctgaacggcggcgccacc
aacaccgacttcatcgacaacgccggcggcgtggactgctccgaccacgaggtcaacatc
aagatcctgctcaacgaagtggtgcagggtggcgacatgaccgagaagcagcgcaaccag
ctgctgggcagcatgaccgacgaagtggccggcctggtgctgggcaacaactacaagcag
acccaggcgctttcgctggccgctcgccgcgcccgcgagcggattgccgagtacaagcgc
ctgatggccgacctcgaggcgcggggcaagctggaccgtgccatcgaattcctgccgtcc
gaagagcagttggccgaacgcctggctgccggccagggcctgacccgcgccgagctgtcg
gtgctgatctcgtacagcaagatcgacctcaaggagcaactgctcaagtcgctggtgccg
gacgacgactacctgacccgtgacatggaaaccgctttcccgccgtccctggtcagcaag
ttcgccgaggccatgcgccgccaccgcctgaagcgcgaaatcgtcagcacccagatcgcc
aacgacctggtcaacaacatgggtatcaccttcgtccagcgcctgaaggagtcgaccggc
atgagcccggccaacgtggccggtgcttacgtgatcgtgcgcgatatcttccacctgccg
cactggttccgccagatcgaggcgctggactatcaggtgccggcagagatccagctcacc
ctgatggacgagctgatgcgactgggccgccgagccacccgctggttcctgcgtagccgc
cgcaacgaacaggacgccgggcgcgataccgcgcacttcgggccgaagatcgcgcagctg
ggtctgaagctggatgagctgctcgaaggccctacccgcgaacgctggatggtccgctac
cagggctttgtcgacgccggtgtgccggagttgctggcgcgtatggtggcgggtaccagc
cacctgtacaccctgctgccgatcattgaagcggccgacgtgaccggccatgagcctgcg
caggtggccaaggcattcttcgccgtgggcagcgcgctggacctgacctggtacctgcag
gaaatcagcaacctgccggtggaaaacaactggcaggcgctggcgcgcgaggcattccgc
gacgatatcgacttgcagcagcgggcgatcaccatttcagtcctgcagatggccgatgca
ccgcaagacatggatgcccgcgtggcgctgtggtcagagcagcatcggggaatggtggag
cgctggcgcgccatgctcgacgacctgcgcaatgccacgggcactgactatgcgatgtac
gcggtggccaaccgcgagctggtcgacctggccatgagcgggcaggcagcggtggtgccg
tcctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (6)   
   KEGG PATHWAY (6)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (11)   
   Pfam (11)   
All databases (33)   

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