KEGG   Pseudomonas putida KT2440: PP_3090
Entry
PP_3090           CDS       T00114                                 

Definition
(RefSeq) OmpA domain-containing protein
  KO
K11891  type VI secretion system protein ImpL
Organism
ppu  Pseudomonas putida KT2440
Pathway
ppu02025  Biofilm formation - Pseudomonas aeruginosa
ppu03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:ppu00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    PP_3090
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02025 Biofilm formation - Pseudomonas aeruginosa
    PP_3090
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:ppu02044]
    PP_3090
Secretion system [BR:ppu02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   PP_3090
SSDB
Motif
Pfam: IcmF-related_N IcmF-related OmpA MMR_HSR1 CcmD
Other DBs
NCBI-GeneID: 1043850
NCBI-ProteinID: NP_745234
UniProt: Q88IA9
Position
complement(3478723..3481218)
AA seq 831 aa
MNKLKYYCLRYQPYLLGVAFFLAIFLVWAIGRAFGFASLHSLLAGIGVFLLLSAGYVLLL
YRGVGQHHNLEGLLRDDADQAVLSAAPADREEVSLLRERLLQGIERLHSNKPRGTSNKDA
LYALPWYLVIGQPAAGKSTMILQSGLNFPYAEREGVRVAGLGGTRNCDWFFSSEAVLLDT
AGRYMNSPEEAGKWRGFLQLLRQHRQRRPLNGLIVSVSIADILHGSVEDQERVAKRLRER
IQESCALLEVRLPIYLVFTKCDLIPGFTAFYRQLDDAARGEVMGKTFSHKGYEQADWGQR
FSNAMDELTRYWGQMASQQLVQQDIQVTRRNDAAYRFPLELAALKPRLHQFVDSLLRANP
YQNAEMLRGFYFTAALQADEAQWGCHGQHVAERFALEHAEGTGTAGSQPAPLFINSLFRK
VIIPDQHLVALYTSNHRERRRKAGWVGAAGLAALVLCSLWGWSYLNNRATLASIADELAQ
AKADDQAASGQYTAWRSLDRLRFWAAHYHEQHHAKGVPLGMRLGLYQGHEVEPLLRDRYF
ATLQNVMLKPTADNLTRTLYLLTTLKVYQRNTRELQPVSGIDSVEAEALPHDNRAQSIAN
FGKAALDTYVMLSPGQREHADPAFLKAHLPDYWYPAIARQTGKSMAAAGSEAGGNQDYLY
ASRQITFYSDQIREPDVPRILDNAFLMSSSRNYIDSLRAQSLRAIETITLESDTLFAFGR
ADFQSLKNEGQHQLSAIASKLLNTPNIGKIIISGHADQLGDSQGNLQVSKQRAQTIRTYL
VGKGVPAELVVAQGEGSRKPLVNCDMQQPRTQLIKCLEPNRRVEIEVRGLN
NT seq 2496 nt   +upstreamnt  +downstreamnt
atgaacaagctcaagtactactgcctgcgctaccaaccctacctgctgggcgtggcgttc
ttcctggcgatcttcctggtctgggccatcggccgcgccttcggcttcgcctcgctgcac
agcctgctggccgggatcggtgtgtttctgctgctgtcggcgggctatgtactgctgctg
taccgcggcgtgggtcagcaccacaaccttgaaggcctgctgcgcgacgacgccgaccag
gccgtactcagtgcagccccggccgaccgggaagaagtcagcctgttgcgcgagcgcctg
ctgcagggcatcgagcgcctgcacagcaacaagccgcgcggtacttcgaacaaggatgcc
ctgtatgccctgccctggtacctggtcattggccagcctgccgccggcaagagcacgatg
atactgcagtcgggcctgaacttcccctatgccgagcgcgaaggcgtgcgggtcgcgggc
ctgggcggcacgcgcaactgcgactggttcttcagctctgaagcggtactgctggacact
gccgggcgttacatgaacagccccgaggaagccggcaagtggcgcggctttttgcaactg
ctgcgccagcaccgccagcgccgtccccttaacggcttgatcgtcagcgtcagcatcgcc
gatattctgcatggctcggtcgaagaccaggagcgcgtggccaagcgcctgcgcgaacgc
attcaggaaagctgcgcgctgcttgaagtgcgcctgccaatctacctggttttcaccaag
tgcgacctgatccctggtttcaccgcgttctatcgccagctggacgacgccgcgcgtggt
gaagtgatgggtaaaaccttctctcacaaggggtacgagcaagccgactggggccaacgc
ttcagcaatgcgatggacgagctgacgcgttactgggggcagatggcgagccagcagctg
gtgcagcaggacatacaagtcacccggcggaacgacgctgcctaccgcttcccgctggag
ctggccgcgctcaagccgcgcctgcatcagttcgtcgacagcctgctgcgtgccaaccct
taccagaatgccgaaatgctgcgcggtttctatttcaccgcggcgctgcaggccgacgag
gctcagtggggctgccacggccagcatgtggccgaacgcttcgcgctcgaacacgcagaa
ggtacgggcactgccggcagccagccggcgccgctgttcatcaacagcctgttccgcaaa
gtgatcattcccgaccagcatttggtggcgctgtacaccagcaaccaccgtgaacgccgg
cgcaaggccgggtgggtgggcgccgccggcctggcggcactggtgctgtgcagcctgtgg
ggctggtcgtacctgaacaaccgcgccaccctggccagcattgccgacgaactggcccag
gccaaggccgacgaccaggcggccagcggccagtacaccgcctggcgaagcctcgaccgc
ttgcgcttctgggctgctcactaccatgagcaacaccacgctaagggcgtgcccctcggc
atgcgcctgggcctgtaccagggccatgaggtcgagccgctgctgcgcgaccgctacttc
gccacgttgcagaacgtgatgctaaagcccacggccgataatctgacccgcaccctgtac
ctgctgaccacgctcaaggtctaccagcgcaacacccgtgagctgcagccagtgagcggc
attgacagcgtagaggccgaggcgctgccccatgacaaccgcgcccagtcgatcgccaat
ttcggaaaggcggccctggacacttacgtgatgctttctccgggccagcgcgagcatgcc
gacccggcgtttctcaaggcgcacctgccggactactggtacccggccatcgcccgccag
accggcaagagcatggccgccgctggcagcgaggccggtggcaaccaggactacctgtat
gccagccgccagatcacgttctatagcgaccagatccgtgagccagatgtaccgcgcatc
ctcgacaacgccttcctgatgtccagttcgcgcaactacatcgacagcctgcgggcccag
tcactgcgtgcgatcgagaccatcacgctggaatccgacaccctgttcgccttcggccgc
gccgatttccagagcctgaaaaacgaaggccagcatcagctgagcgcaattgccagcaag
ctgctgaacaccccgaatatcggcaagatcatcatctcggggcacgccgaccaactgggt
gacagccagggcaacctgcaggtttcgaaacaacgggcgcaaaccatccgcacctatctg
gttggcaagggcgtacctgccgagctggtggtcgcgcagggcgaaggcagccgcaagcca
ttggtcaactgcgacatgcaacaaccgcgaacgcagttgatcaagtgcctggagcccaac
cgccgggtggaaatcgaagtgcgtgggcttaactga

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