KEGG   Pseudomonas putida KT2440: PP_4082Help
Entry
PP_4082           CDS       T00114                                 

Gene name
hcpC-II
Definition
(RefSeq) hemolysin-coregulated protein
  KO
K11903  type VI secretion system secreted protein Hcp
Organism
ppu  Pseudomonas putida KT2440
Pathway
ppu02025  Biofilm formation - Pseudomonas aeruginosa
ppu03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:ppu00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    PP_4082 (hcpC-II)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02025 Biofilm formation - Pseudomonas aeruginosa
    PP_4082 (hcpC-II)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:ppu02044]
    PP_4082 (hcpC-II)
Secretion system [BR:ppu02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   PP_4082 (hcpC-II)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: T6SS_HCP
Motif
Other DBs
NCBI-GeneID: 1042181
NCBI-ProteinID: NP_746207
UniProt: Q88FK8
Position
4610523..4611038
Genome map
AA seq 171 aa AA seqDB search
MPTPAYIKIVGQTQGNITAGAFTADSVGNVFQQGHEDQILVQEIKHEVTTPTDPQSGQPS
GQRVHKPFIFTSSLNKATPLMYQALATGEMLPTVEVSWYRTSSEGKQEHFFTTTLEDATI
VSINTVLPHALDKDNENYTQLVEVSLAYRKITWAHDVANTEGSDDWRAPAA
NT seq 516 nt NT seq  +upstreamnt  +downstreamnt
atgccaacacccgcttacatcaagatcgtaggccagacccaaggcaacatcaccgctggc
gccttcaccgctgactccgtcggcaacgtgttccaacaaggccatgaagatcagattctg
gttcaggaaatcaagcatgaggtgactacgcccactgacccccagagcggtcaaccgagt
ggccagcgcgtgcataagcctttcatattcaccagttcactgaacaaagctacccccctg
atgtatcaggcacttgccaccggcgaaatgctgccaacagtcgaggtcagctggtatcgc
acctcctcggaaggcaaacaagagcattttttcaccaccacgctcgaagacgccaccatc
gtcagcatcaataccgtgcttccccacgcactcgacaaagacaatgaaaactacacccag
ctggttgaagtatcgctggcgtatcgaaagatcacgtgggctcacgatgtagccaatacc
gaaggctctgacgactggcgcgcacccgccgcctga

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