KEGG   Pseudomonas putida KT2440: PP_4346
Entry
PP_4346           CDS       T00114                                 
Symbol
ddlA
Name
(GenBank) D-alanine--D-alanine ligase A
  KO
K01921  D-alanine-D-alanine ligase [EC:6.3.2.4]
Organism
ppu  Pseudomonas putida KT2440
Pathway
ppu00470  D-Amino acid metabolism
ppu00550  Peptidoglycan biosynthesis
ppu01100  Metabolic pathways
ppu01502  Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:ppu00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    PP_4346 (ddlA)
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    PP_4346 (ddlA)
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01502 Vancomycin resistance
    PP_4346 (ddlA)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:ppu01011]
    PP_4346 (ddlA)
Enzymes [BR:ppu01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.4  D-alanine---D-alanine ligase
     PP_4346 (ddlA)
Peptidoglycan biosynthesis and degradation proteins [BR:ppu01011]
 Precursor biosynthesis
  Amino acid ligase
   PP_4346 (ddlA)
SSDB
Motif
Pfam: Dala_Dala_lig_C Dala_Dala_lig_N ATP-grasp ATP-grasp_3 ATP-grasp_4 ATPgrasp_ST
Other DBs
NCBI-ProteinID: AAN69925
UniProt: Q88EV6
Position
complement(4937694..4938752)
AA seq 352 aa
MKQNVIALVFGGRSSEHSVALRSAATIHAALMALGHRVHCVGIDREGNWRYQGEPCQFPG
AVDRSAPLISIRPGHRSLSYTTQESGTVEIGIDLLFPALHGRWGEDGTIQGLAAMCGLPC
VGSGVLGSAMAMDKDVTKRMVQSAGLVVVPWLAMNSMRPWEELVECLGSSTLFVKPATSG
SSIGVSRVSNALEYAAAFAIAAREDTKVLVEAAVCGREIECGVLELEEGLMASVVGEIIK
KEGHAYYDYQAKYDSNSVTGLRVPSLLPPDIVARIQALSVQAFRCLELKGYARVDFFLTE
EGEIILNEINTLPGFTSASMYPKMFECSGYPPPKLVGALVEYGLSSASKERL
NT seq 1059 nt   +upstreamnt  +downstreamnt
atgaaacaaaatgtgatcgcactggtttttggggggcggagctcagagcattcagtggcg
ctacgctccgccgctacaatccacgcggcgctgatggctctcggtcacagggtgcactgt
gtagggatagatcgtgagggcaactggaggtatcaaggagagccgtgccagttccctggt
gcggttgatcggtcggctccgttgatttcaattcgtccaggccatcgctcgctctcatac
acaactcaagagagcggcacggtggagattgggatcgatttgcttttcccggcactgcat
ggtcggtggggggaggatggaacaattcaaggattggcagcgatgtgcggtttgccgtgt
gtgggctccggggtgctaggttcggcaatggccatggataaagatgtcacaaagagaatg
gtccagtctgccgggcttgttgtggtgccttggctggccatgaactccatgcgtccttgg
gaggaactggttgagtgcctgggtagcagcacgctcttcgtaaagcccgctacttcgggc
tcatcgattggtgtgtctagggtctccaacgccttggaatatgctgcggcatttgctatt
gcagcacgagaggacacaaaggtgctggtggaggctgctgtctgtggaagagagatagag
tgtggtgtgctcgaacttgaggagggtttgatggcctcggtggtgggtgaaataatcaaa
aaggaagggcacgcctattacgattatcaggcgaaatacgattccaacagtgtgacaggt
cttcgtgtgccaagcttgttgccacctgacattgtcgcgcgcatccaggctttatctgtc
caggcgtttagatgccttgaactgaaggggtacgccagggtggattttttcttgacagaa
gagggtgaaattattctcaatgagatcaataccttacccggatttacgagtgccagtatg
tacccgaagatgtttgagtgctccggttaccctccgccgaagttggtaggagcgctagtc
gaatatgggctctcatcagcatctaaagaacgtttatga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (6)   
   Pfam (6)   
All databases (26)   

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