KEGG   Pseudomonas putida DLL-E4: DW66_3102
Entry
DW66_3102         CDS       T03439                                 
Name
(GenBank) ImcF domain-containing protein
  KO
K11891  type VI secretion system protein ImpL
Organism
ppud  Pseudomonas putida DLL-E4
Pathway
ppud02025  Biofilm formation - Pseudomonas aeruginosa
ppud03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:ppud00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    DW66_3102
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02025 Biofilm formation - Pseudomonas aeruginosa
    DW66_3102
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:ppud02044]
    DW66_3102
Secretion system [BR:ppud02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   DW66_3102
SSDB
Motif
Pfam: IcmF-related_N IcmF-related IcmF_C IcmF_helical MMR_HSR1 AAA_16 FMN_red CAP59_mtransfer DUF4131
Other DBs
NCBI-ProteinID: AHZ77611
UniProt: A0A059USV7
Position
3374347..3378150
AA seq 1267 aa
MKTLLRLLKNFWFLLLLLWLASLLTCWLVAPLLPWLQQHLPEALAIISACFLLVIVLRQY
QRIRAEHNLENLLQIEVDRSWNATGEFRDQQVLRERLKHAIAMLRTDRSAGGGGKAALSD
LPWYLVVGMSAAGKTSLLTHSGLSASIATANDSESGTQHCDWYFSPDAVMIDTAGRYLRD
DQSASEFSAFLRMLRKQRGKAAINGLVMVVSLPELLAANSDERNALAAQLVARVEEYAEC
LDANPPVYLMLSKTDQLPGFSQAFDGLDLHERQQPLGMTFGLSEIRNNGLHAVLQTRLGN
LQNHIRQHVDAQVIALGAEADSTLLNFPQYFAALSGVLEQFLEHFTRGHRGGAPLLLRGL
YFTSALQTGQQLGQVYEDVIADEFALQAAYDEHAENVGKAAGNRSYFITDTFRQVIFPDR
DLTLYQSRLGRQAAFSPLLLGLAAATGLLFIGWQALSFTNNRQWLDSLRGQLAQIEQAED
REQQLAAGKGLEVLREQMARVENHRLQGVPLQLGGGLYHGEAIHQVTRTAYLAQLRSQAL
EPIARSLQVQMRAFNTFANGINQELEFTPAPTPKKRNGKPLAPAIAAKAQAALGNSRAGA
YAAKVNLATASDAAELSATTGGLSLSEEMLGRLDEQQVASIIDAYNTLKLYLLLTEPQGH
PDPAFVAANLPQAWASAATEGTPADAAVIAENAPLYVQLLEQGQAPSLPRNEQLINETRQ
NLKSFMISSSLVDREYLRLQLESSRQFPALSLNDLVPQPGRALLYGSAGVPAIYTRQGWD
TFVKPELIKLVSGNLRNESDWVLDGEGGDAIVQKANFVREFMTRYKRDYTQAWYKMVSSV
GVRHFADLASASQQLGLLSDVQNSPVKNLLAAVHDNTQWDLPVKHAIPAPGSTRDDGFWS
KVSGLLDTKDALPANVAPALPAVDDGSLAKRFEPVARVFAVNNAEGADSTIMDRYLAALR
KLKVRMNNIQRSQDVGKSSKQLISETLEGQPSEVTTVRNYVESSVDTSQDGLSRSLQGLF
SLPIQYTWATLRDPAGQQIAKAWAQQIAKPWEQVMAHRYPIAGSSRNEASVKDLQRFVDP
DSGLLPAFKRNEIGNLAGGEGLGVGDGKAPALVNPGMLNSIDKASSVGQVIASLSDRDNG
FEIMLEPSANFTDIVFTLDGQEQHYRNGRSSWNRFAWPGTSNAPGARLDVVTLSGARVTV
FDFPGRWGLLRMNESARVEDLDGIQQRFSWNTASGRVSLVVRNFGGVKLTDLGDVKALSA
LNDRGAQ
NT seq 3804 nt   +upstreamnt  +downstreamnt
atgaaaacattattgcgccttttgaagaatttctggtttctcctgctgctgctgtggctg
gcgagcctgttgacctgctggttggtcgccccgttgctgccatggctgcaacagcacctg
cccgaagcactggcaatcatcagcgcctgcttcctgctggtgatcgtgctgcgccaatac
cagcgcattcgcgccgagcacaacctggagaacctgctgcagatcgaggttgatcgctcg
tggaatgccactggcgagttccgtgaccagcaggtgctgcgcgaacgcctcaagcatgcc
attgccatgttgcgcaccgaccgctccgctggaggcggtggcaaggcggcactgtccgat
ttgccctggtacctggtggttggcatgtcggcagccggcaagacctcgctgctgacccat
tccggcctgtcggccagcattgccacggccaacgacagcgaaagcggcacccagcactgc
gactggtacttcagccccgacgcggtaatgatcgacaccgccggccgctatttgcgtgat
gaccagtcggccagcgagttctcggccttcctgcgcatgctgcgcaagcagcgcggcaag
gcagcgatcaatggcctggtaatggtggtcagcctgcccgagctgctggcggccaacagc
gacgaacgcaatgccctggcggcccagctggtggcgcgggtggaagagtatgccgagtgc
ctcgacgccaacccgccggtctacctgatgctgagcaagaccgaccagttgccgggcttc
agccaggcgttcgacggcctcgatctgcatgaacgccagcaaccgctgggcatgaccttc
ggcctgtcggaaatccgcaacaacggcctgcacgccgtgctgcagacgcgcctgggcaac
ctgcagaaccacattcgccagcatgtcgacgcgcaggtgatcgccctcggtgccgaagcc
gacagcaccctgttgaacttcccgcaatacttcgccgcactcagcggtgtcctcgagcag
ttcctggagcacttcacccgcggccatcgcggcggtgccccgctgctgctgcgcggcttg
tacttcaccagtgccctgcagaccgggcagcagctgggccaggtatacgaagacgtcatc
gccgacgaattcgccctgcaagccgcctacgatgagcacgccgagaacgtcggcaaggcc
gcgggcaaccgcagctacttcatcaccgacaccttccgccaggtgatattccccgatcgc
gacctgaccctgtaccagtcgcgcctgggccgccaggctgcgttcagcccgctgctgctg
ggcctggccgccgccaccgggttgctgttcatcggttggcaggcactgtcgttcaccaat
aaccgccaatggctggacagcctgcgcgggcagctggcgcagatcgagcaggcagaagac
cgcgagcagcagctggccgctggcaagggcctggaagtgctgcgcgaacagatggcccgc
gtcgaaaaccatcgcctgcagggtgtaccactgcagttggggggtggcctgtaccatggc
gaagccatccaccaggtgactcgcaccgcctacctggcgcaactgcgcagccaggcgctg
gagccgatcgcacgcagcctgcaagtgcagatgcgggccttcaacaccttcgccaacggt
atcaaccaggagctggaattcaccccggccccgacaccgaaaaaacgcaatggcaagccg
ctggccccggccattgcagccaaggcccaggctgcgctgggcaacagccgcgccggtgcc
tatgccgccaaggtcaacctggccaccgccagcgatgccgccgagctgtctgccaccacc
ggtggcctgtcactgtccgaagaaatgctcgggcgcctcgacgaacagcaggtggcctcg
atcatcgatgcctacaacaccctcaagctgtacctgttgctgaccgagccccaaggccat
ccggacccggccttcgtcgctgccaacctgccccaggcctgggccagcgccgccaccgaa
ggcactccggccgacgcagccgtgatcgcagaaaatgccccgctttacgtacagttgctg
gaacaaggccaggcgccgtcgttgccgcgtaacgaacagctgatcaacgaaacccggcag
aatctcaagtcgttcatgatctccagctcgctggtcgatcgcgagtacctgcgcctgcaa
ctcgagtcgagccgccagttcccagcactgagcctgaacgacctggtgccgcaaccgggc
cgcgcgttgctgtatggctctgctggcgtaccggcaatctatacccgccagggctgggac
accttcgtcaagccggaactgatcaagctggtgtcgggcaacctgcgcaacgagtcggac
tgggtgctggacggtgaaggtggcgatgccatcgtgcaaaaggccaacttcgtgcgcgag
ttcatgacccgctacaaacgcgactacacccaggcctggtacaagatggtcagcagcgtg
ggggtacgccacttcgccgacctggcctcggcctcccagcagctggggctgctcagcgat
gtgcagaactcgccggtgaagaacctgctggcggcggtccatgacaacacccagtgggac
ctgccggtcaagcacgccatcccggcccccggtagtacccgcgatgacggcttctggagc
aaggtctccggcctgctcgacaccaaggacgccctgcccgccaatgtcgccccggccctg
ccggcggtggacgacggcagcctggccaagcgcttcgaaccggtggcgcgggtatttgcc
gtaaacaacgccgaaggcgccgacagcaccatcatggaccgctacctggccgccttgcgc
aagctcaaggtacgcatgaacaacatccagcgttcgcaggatgtgggcaagagcagcaag
cagctgatcagcgagaccctggaaggccagccgagcgaagtcaccaccgtgcgcaactac
gtggaaagcagcgtcgacaccagccaggacggcctgtcgcgctcgctgcaggggctgttc
agcctgcctatccagtatacctgggcgaccctgcgcgacccggccggccagcagatcgcc
aaggcctgggcccagcagatcgccaagccttgggaacaggtcatggcacaccgctacccg
attgccggcagcagccgcaacgaggcgtcggtaaaggacctgcagcgcttcgtcgacccc
gacagcggcctgctgccggccttcaagcgcaacgaaatcggcaatctggccgggggtgaa
ggcctgggtgtgggcgacggcaaggcaccggcgctggtcaacccaggcatgctcaacagc
atcgacaaggccagctccgtgggccaggtgatcgccagcctgtcggaccgtgacaacggc
ttcgaaatcatgctggaaccttctgccaacttcaccgacatcgtgttcaccctcgatggc
caggaacagcactaccgcaacggccgcagtagctggaaccgcttcgcctggccgggcacc
agcaacgctccgggtgcccgcctggatgtggtcaccctcagtggcgcgcgggtcaccgtg
ttcgacttccccgggcgctggggcctgctgcgcatgaacgaaagcgcccgggtcgaggac
ctggacggcattcagcaacgcttcagctggaacaccgccagcggccgcgtgagccttgta
gtgcgtaacttcggtggggtgaaactgaccgacctgggtgatgtcaaggcgctgagcgcc
ctcaacgacaggggcgcccaatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (18)   

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