KEGG   Pseudomonas putida DLL-E4: DW66_3549
Entry
DW66_3549         CDS       T03439                                 
Name
(GenBank) transcriptional regulator CRP/FNR
  KO
K10914  CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
ppud  Pseudomonas putida DLL-E4
Pathway
ppud02020  Two-component system
ppud02024  Quorum sensing
ppud02025  Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:ppud00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    DW66_3549
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    DW66_3549
   02025 Biofilm formation - Pseudomonas aeruginosa
    DW66_3549
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ppud03000]
    DW66_3549
Transcription factors [BR:ppud03000]
 Prokaryotic type
  Helix-turn-helix
   CRP/FNR family
    DW66_3549
SSDB
Motif
Pfam: HTH_Crp_2 cNMP_binding HTH_24 MarR_2 MarR
Other DBs
NCBI-ProteinID: AHZ78056
UniProt: A0A059UTQ8
Position
complement(3885947..3886462)
AA seq 171 aa
MGTVVADGREALHAVLGPTAWIGEISMFDGSPRPHDALAMTNVLVLHVRGSALKSLLKQQ
PVYWRDFGLLMAQKIRVSFENNESMQLLSAAQRLASRLLLIANGYSGLNERQSSLRISQD
ALGSMISLTRQTTNQLLRNLESQGIISLKVGEITIRDFDRLRAASLGQASH
NT seq 516 nt   +upstreamnt  +downstreamnt
atgggcacggtggttgcggatggtagagaggccttgcatgccgtactcggcccgaccgcc
tggatcggcgagatttccatgtttgatggatcgccgcgcccgcatgacgcattagcgatg
actaatgtgctcgtactgcatgtacgtggctcagctctgaaaagcctactgaaacaacaa
ccggtctattggcgtgactttgggttgttgatggcgcaaaaaattcgcgtgtcctttgaa
aacaatgaatcgatgcagcttctatcagccgcacagcgcctggcgagtcgtctcctgctg
atcgccaatggttacagcgggctcaatgaacgacaaagcagcttgaggatttcgcaggac
gctttggggtcgatgatttcgttgacccgacagacaaccaatcaactgcttagaaacctg
gagagtcagggaatcatcagcttgaaggttggagaaattactattcgagactttgatcgt
ttgagggccgcgagcctgggacaggctagtcactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (15)   

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