KEGG   Pseudomonas putida DLL-E4: DW66_4097
Entry
DW66_4097         CDS       T03439                                 
Name
(GenBank) recombination protein RecR
  KO
K06187  recombination protein RecR
Organism
ppud  Pseudomonas putida DLL-E4
Pathway
ppud03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ppud00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    DW66_4097
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ppud03400]
    DW66_4097
DNA repair and recombination proteins [BR:ppud03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     DW66_4097
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      DW66_4097
SSDB
Motif
Pfam: Toprim_4 RecR_HhH RecR_C Toprim RecR_ZnF HHH_5 DZR HypA HHH HVO_2753_ZBP Toprim_2
Other DBs
NCBI-ProteinID: AHZ78602
UniProt: A0A059V039
Position
complement(4482581..4483183)
AA seq 200 aa
MSFSPLIRQLIDALRILPGVGQKTAQRMALQLLERDRSGGLRLAQALTQAMEGVGHCRQC
RTLTEQELCPQCGDTRRDDTQLCVVEGPTDVYAVEQTGYRGRYFVLKGHLSPLDGLGPEA
IGVPQLMARIEEQGTFTEVILATNPTVEGEATAHYIAQLLSEKGLVASRIAHGVPLGGEL
ELVDGGTLAHAFAGRRPISL
NT seq 603 nt   +upstreamnt  +downstreamnt
atgagcttcagcccactcatccgccaactgatcgatgccctgcgtattctcccgggtgtc
ggccagaaaaccgcccagcgcatggccctgcaactgctcgagcgtgaccgtagcggtggc
ctgcgcctggcacaggccttgacccaggccatggaaggggttgggcattgccgtcagtgc
cgtaccctgaccgagcaggagctgtgcccgcaatgcggcgacacgcgccgtgacgatacc
cagttgtgtgtggtcgaagggccgaccgatgtgtatgcagtggagcagaccggctaccgt
ggccgctacttcgtgctcaagggccacttgtcgccgctggacgggctggggcccgaggcg
atcggggttccgcagctgatggcgcggatcgaggagcagggcaccttcaccgaggtgatc
ctggcgaccaacccgacggtggaaggggaggcgacggcgcattacattgcccagttgctg
agcgagaagggcctggtggcgtcgcggattgcccatggtgtaccgctgggcggcgagctt
gagctggtggatggtgggaccttggcccatgcttttgcggggcgtcggccgatttcgctc
tga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (11)   
   Pfam (11)   
All databases (19)   

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