KEGG   Pseudomonas putida DLL-E4: DW66_5009
Entry
DW66_5009         CDS       T03439                                 
Name
(GenBank) pseudouridine synthase
  KO
K06181  23S rRNA pseudouridine2457 synthase [EC:5.4.99.20]
Organism
ppud  Pseudomonas putida DLL-E4
Brite
KEGG Orthology (KO) [BR:ppud00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ppud03009]
    DW66_5009
Enzymes [BR:ppud01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.20  23S rRNA pseudouridine2457 synthase
     DW66_5009
Ribosome biogenesis [BR:ppud03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    DW66_5009
SSDB
Motif
Pfam: PseudoU_synth_2 DUF5818
Other DBs
NCBI-ProteinID: AHZ79506
UniProt: A0A059UXW5
Position
complement(5509817..5510449)
AA seq 210 aa
MSLPPRSKPRRPQARPATGPRRQPKAPPAEPRLILFNKPFDVLTQFSDGDGRATLKDYID
IPGVYPAGRLDRDSEGLLLLTNDGGLQARIADPKHKLAKTYWVQVEGEPSEEQLRRLRDG
VELNDGPTLPAEARRLDEPALWPRNPPVRFRKSVPTSWLELVIREGRNRQVRRMTAAVGL
PTLRLVRVRIGDWALDGLEQGCWREVAAKL
NT seq 633 nt   +upstreamnt  +downstreamnt
atgtcactgccaccccgttccaagccgcgccgcccccaggcgcggcctgccaccggcccg
cgtcgccagcccaaggcgccaccggccgagccgcgcctgatcctgttcaacaaaccgttc
gacgtgctgacccagttcagcgacggcgacgggcgcgcgacgctcaaggactacatcgac
atccccggtgtgtacccggccgggcggctggaccgcgatagtgaaggcctgttgctgcta
accaacgatggcggcctgcaggcgcgcattgccgacccgaagcacaagctggccaagact
tattgggttcaggtggagggggagccgagcgaggagcagttgcggcgcttgcgcgatggc
gtggaactgaacgatgggccgaccttgccggccgaggcgcggcgcctggacgagccggcg
ctgtggccgcgcaacccgccggtgcgttttcgcaagagcgtgccgaccagctggctggag
ctggtgattcgcgaagggcgtaaccgccaggtgcggcggatgacggctgcggtggggttg
ccgaccttgcgcctggtgcgggtgcggattggcgactgggcgctggatgggttggagcag
gggtgctggcgcgaagtggccgccaagctttag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

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