KEGG   Pseudomonas putida HB3267: B479_05520
Entry
B479_05520        CDS       T02389                                 
Name
(GenBank) general secretion pathway protein D
  KO
K02453  general secretion pathway protein D
Organism
ppuh  Pseudomonas putida HB3267
Pathway
ppuh03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:ppuh00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    B479_05520
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:ppuh02044]
    B479_05520
Secretion system [BR:ppuh02044]
 Type II secretion system
  General secretion pathway protein
   B479_05520
SSDB
Motif
Pfam: Secretin Secretin_N type_II_gspD_N0 AAA_28
Other DBs
NCBI-ProteinID: AGA72020
Position
1246887..1248632
AA seq 581 aa
MAAALSLALSMACAEEPVFDDNGTPMYEVNFVDTELGEFIDSVSRITGTTFIVDPRVKGK
VTVRTVDLHDADAIYDIFLAQLRAQGYATVDLPNGSVKIVPDQAARLEPVPVEAGGQQGE
GSDSVATRVFNVRNAASEQVLGILKPLIDPRVGVITPYPAAHQLVVTDWRSNLERIASLL
RQLDRPQDAPGSGSTQVIYLRHANAGEVVKVLRGLSQEGMAPSEGAGEAEGKERPVVPVA
GGAGIRLEYEEGTNAVVMVGPDSELAAYRAIVEQLDIRRAQVVVEAIIAEVSDSSAQELG
VQWLFADEKFGAGIVNFGSNGVNIASIAGAAASGDNEALGDLLSSTTGAMAGIGHFGGGF
NFAMLVNALKGKSGFNLLSTPTLLTLDNAEASILVGQEVPFVTGSVTQNNANPYQTIERK
EVGVKLRIKPQINIDNSVRLDIVQEVSSIADTTAASDVITNKREIKTKVMVEDNGLVILG
GLISDELSTSDQRVPLLGDIPYLGRLFRSDATKNTKQNLMVFIRPRILRDGPSLAGLSED
KYRTLQQTTPLQLPDLADAQNATPLLQVFPSSRARLEGGDW
NT seq 1746 nt   +upstreamnt  +downstreamnt
gtggcggccgcactgagcctggccctgtccatggcttgtgctgaagagccggtgttcgac
gacaacggtacgccgatgtacgaggtgaacttcgtcgacaccgaactgggcgagttcatc
gacagcgtgtcgcgcatcaccggcaccaccttcatcgtcgacccccgggtcaagggcaag
gtcaccgtgcgcaccgtcgacctgcacgacgccgatgccatctacgacatctttctggcc
cagctgcgcgcccagggctacgccactgtcgacctgcccaatggcagcgtgaagatcgtt
cccgaccaggccgcccgcctggagcctgtgccggtggaggcgggagggcagcagggggaa
ggcagcgacagtgtggctacgcgggtattcaatgtgcgtaacgccgccagcgagcaggtg
ctgggcattctcaagcccctgatcgacccacgggtcggtgtgatcacaccttatccggca
gcgcaccagttggtagttaccgactggcgcagcaacctggaacgtatcgccagcttgctg
cgccagctcgaccgcccccaggacgcaccaggcagcggcagtacccaggtcatctacctg
cgccatgccaatgctggcgaagtggtcaaggtgttgcgtgggctcagccaggaaggcatg
gcgccctctgaaggtgcgggcgaagcagagggcaaggaaaggcccgtagtgcctgtcgcc
gggggggcgggcatccgcctggaatacgaagaaggcaccaacgccgtggtcatggtcggc
cccgacagcgagctggccgcttaccgcgccatcgtcgagcagctggacatccgccgtgcc
caggtagtggtggaagcgatcatcgccgaggtgtccgacagcagcgcccaggaactgggc
gtgcagtggctgttcgctgacgagaagttcggtgccggcatcgtcaacttcggtagcaac
ggggtaaacatcgccagcatcgcaggggccgctgccagcggcgacaacgaggcccttggc
gatttgctgtccagcaccaccggcgccatggcgggtatcggccatttcggcggcggcttc
aacttcgccatgctggtcaacgcgctgaagggcaagagcggcttcaacctgctgtccacg
cccaccctgctgaccctggacaacgccgaggcgtcgatcctggtcggccaggaagtgccc
ttcgtcaccggatcggtgacgcagaacaacgccaacccgtaccagaccatcgagcgcaag
gaagtcggggtgaagctgcgcatcaagccgcagatcaacatcgacaacagcgtgcgcctg
gacatcgtccaggaagtgtcgtcgattgccgacaccacggctgccagcgacgtgatcacc
aacaagcgcgagatcaagaccaaggtcatggtcgaggacaacggcctggtgatcctcggc
ggcctgatcagcgacgaactgagcaccagcgaccagcgtgtgccgctgcttggcgatatc
ccttacctgggccggctgttccgctccgacgccacgaagaacaccaagcagaacctgatg
gtgttcatccgcccgcgcatcctgcgtgacgggccgagcctggccgggctcagcgaagac
aagtaccgcaccttgcagcagaccacgccgctgcagttgcccgacctggcggatgcccaa
aacgctacgccgctgttgcaggtgttcccctccagccgcgcacggctggaaggcggtgac
tggtga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (11)   

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