KEGG T02389: B479

Pseudomonas putida HB3267: B479_06655

Entry

B479_06655        CDS       T02389

Name

(GenBank) ribosomal large subunit pseudouridine synthase A

K06177

tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]

Organism

ppuh Pseudomonas putida HB3267

Brite

KEGG Orthology (KO) [BR:ppuh00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ppuh03009]
    B479_06655
   03016 Transfer RNA biogenesis [BR:ppuh03016]
    B479_06655
Enzymes [BR:ppuh01000]
5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.28  tRNA pseudouridine32 synthase
     B479_06655
    5.4.99.29  23S rRNA pseudouridine746 synthase
     B479_06655
Ribosome biogenesis [BR:ppuh03009]
Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    B479_06655
Transfer RNA biogenesis [BR:ppuh03016]
Prokaryotic type
  tRNA modification factors
   Psudouridine synthases
    B479_06655

SSDB

Motif

Pfam:

PseudoU_synth_2

Other DBs

NCBI-ProteinID:

AGA72247

Position

complement(1486955..1487590)

AA seq 211 aa
MPLSNIQILHEDAAILVINKPTLLLSVPGRAEDNKDCLITRLQENGYPDALIVHRLDWET
SGIILLARDADSHRELSRQFHDRETEKAYTALCWGQPALDSGSIDLPLRYDPPTKPRHVV
DHEQGKHALTFWRIVERCGDYCRVELTPITGRSHQLRVHMLSIGHPLLGDRLYANPEALA
AHERLCLHASMLSFTHPVSGERLKFECPAPF

NT seq 636 nt +upstreamnt +downstreamnt
atgccgctgtccaacatccagatcctgcacgaagacgccgccatcctggtgatcaacaaa
ccgaccctgctgctgtcggtacccggccgcgccgaggacaacaaggactgcctgatcact
cgcctgcaggaaaacggctaccccgacgcgctgatcgtgcaccgcctggactgggaaact
tccggcatcatcctgctggcccgggatgccgacagccatcgtgagctgtcgcgccagttc
cacgaccgcgaaaccgaaaaggcctacaccgcgctgtgctggggccagccggcgctggac
agcggcagcatcgacctgccgctgcgctacgacccgccgaccaagccacggcatgtggtg
gaccacgagcagggcaagcatgcgctgaccttctggcgcatcgtcgagcgctgcggtgat
tactgccgggtagagctgacaccgattaccgggcgttcgcaccagttgcgcgtgcacatg
ctgtcgatcgggcacccgctgctgggcgaccggctgtatgccaaccccgaagcactggct
gcccatgagcggttgtgcctgcatgcctcgatgctgagctttacccacccggtgtccggg
gagcggttgaagttcgagtgccctgcgcctttctga

All links

Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (11)   

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