KEGG   Pseudomonas putida HB3267: B479_17115
Entry
B479_17115        CDS       T02389                                 
Name
(GenBank) ribonuclease Z
  KO
K00784  ribonuclease Z [EC:3.1.26.11]
Organism
ppuh  Pseudomonas putida HB3267
Brite
KEGG Orthology (KO) [BR:ppuh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ppuh03016]
    B479_17115
Enzymes [BR:ppuh01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.11  tRNase Z
     B479_17115
Transfer RNA biogenesis [BR:ppuh03016]
 Eukaryotic type
  3'processing and CCA adding factors
   3'processing factors
    B479_17115
 Prokaryotic type
    B479_17115
SSDB
Motif
Pfam: Lactamase_B_2 Lactamase_B Lactamase_B_4 NAD_binding_10
Other DBs
NCBI-ProteinID: AGA74315
Position
3748422..3749381
AA seq 319 aa
MDLLFLGTSAGVPTKTRNVSGTAVIEASGSHWYLVDCGEGTQHRLLHTPLSIRDLRAIFI
THVHGDHCFGLPGLLASAGMSGRTQPLDLVLPAALHDWVRQGLVASDTFLPFELRLLAVE
DLVEWRSDALEVTSVQLSHRVPSVGFVFTELNPEPRLNIPRLEAEGIPRGPLWGELAKGL
TVQHGGRRLHGKDYLRPSRPPRRVIVCGDNDNPELLADAARGADVLVHEATFTQAVVERT
GVTFGHSTAAAVARFAEAAGVRNLVLTHFSARYQNDPRRSPSIDNVRDEALAHYSGQLTL
AQDLQRYHIGRDGCLEPAG
NT seq 960 nt   +upstreamnt  +downstreamnt
atggacctgctgttcctgggcacctccgccggcgtgccgaccaagacacgcaatgtgagc
ggtaccgcagtaatcgaggccagtggcagccactggtacctggtcgactgtggcgaaggc
acccagcaccggctgctgcacacaccgctgtcgatccgcgacctgcgcgccatcttcatt
acccacgtgcacggcgaccattgcttcggcctgccgggcctgctggccagcgccggcatg
agcgggcgcacccagccgctggaccttgtcctgcccgccgccctgcacgactgggtgcgc
caggggctggtggccagcgataccttcctgccgttcgaactgcgcctgctggccgtggaa
gatctggtggagtggcgcagtgacgccctggaagtgactagcgtgcagctgtcgcaccgg
gtgccgagcgtcggcttcgtgttcaccgagctcaaccccgaaccgcgactgaacatcccg
cgcctggaagccgaaggtatcccccgcggcccgctgtggggcgagctggccaagggtttg
acggtgcagcatggcggtcggcggctgcacggcaaggattacctgcgcccttcgcgcccg
ccgcggcgggtgatcgtgtgcggcgacaacgacaaccccgagctactggccgatgccgcc
aggggcgcggacgtgctggtgcacgaagccacgttcacccaggcggtggttgagcgcacg
ggagtcaccttcggccacagcaccgcggctgcggtggcgcgctttgccgaagcggcgggc
gtgcgcaacctggtgctgacgcacttcagcgcccgctaccagaacgacccacggcgcagc
ccgagcatcgacaacgtgcgcgacgaagccctcgcccactacagcgggcagcttaccctg
gcgcaggacctgcagcgctatcacatcgggcgcgatggctgtctcgaaccggccggatga

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