KEGG   Pseudomonas putida HB3267: B479_25215
Entry
B479_25215        CDS       T02389                                 
Name
(GenBank) RNA pyrophosphohydrolase
  KO
K08311  putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
ppuh  Pseudomonas putida HB3267
Pathway
ppuh03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ppuh00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    B479_25215
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ppuh03019]
    B479_25215
Messenger RNA biogenesis [BR:ppuh03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     B479_25215
SSDB
Motif
Pfam: NUDIX NUDIX_4 NUDIX_2
Other DBs
NCBI-ProteinID: AGA75932
Position
complement(5574859..5575338)
AA seq 159 aa
MIDPDGFRPNVGIILTNDAGQVLWARRINQDAWQFPQGGINPDETPEDALYRELNEEVGL
ERDDVEILACTRGWLRYRLPQRLVRTHSQPLCIGQKQKWFLLRLVSNEQRVRMDLTGKPE
FDGWRWVSYWYPLGQVVTFKREVYRRALKELAPRLLTRD
NT seq 480 nt   +upstreamnt  +downstreamnt
gtgatcgacccggatggttttcgccccaatgtcgggatcattctcacgaatgatgccggg
caggtgctatgggctcgacggatcaaccaggatgcctggcagtttccccagggtggcatc
aaccctgacgagacgccggaagatgccctgtaccgcgagctgaacgaagaagttggcctt
gaacgcgatgatgtggaaattcttgcctgcacccgtggctggttgcgttatcgtttaccc
cagcgactggtgcgtacgcatagccagccgctgtgcatcggccagaagcagaaatggttc
ctgctgcgtctggtcagcaacgaacaacgggtgcggatggacctgaccggcaagccggaa
ttcgacggctggcgctgggtcagctattggtacccgctgggccaggttgtgacattcaag
cgcgaggtctaccgacgcgccctgaaagagctagcaccgcgtctgctgacgcgcgactga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (15)   

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