KEGG   Pectobacterium punjabense: E2566_03755
Entry
E2566_03755       CDS       T06530                                 
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
ppuj  Pectobacterium punjabense
Pathway
ppuj03410  Base excision repair
ppuj03430  Mismatch repair
ppuj03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ppuj00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    E2566_03755 (recJ)
   03430 Mismatch repair
    E2566_03755 (recJ)
   03440 Homologous recombination
    E2566_03755 (recJ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ppuj03400]
    E2566_03755 (recJ)
DNA repair and recombination proteins [BR:ppuj03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     E2566_03755 (recJ)
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     E2566_03755 (recJ)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      E2566_03755 (recJ)
SSDB
Motif
Pfam: DHH DHHA1 RecJ_OB
Other DBs
NCBI-ProteinID: QJA19110
Position
815322..817076
AA seq 584 aa
MITQLRRRPLAEDIDLPDTVPPLLRRLYAQRGVKGAQELERSLSGLLNYRLLSGIDKAID
LLQLALAEKRCIVIVGDFDADGATSTTLAVLALRSMGGTNVKYLVPNRFEDGYGLSPAVV
AQAAALGAELIVTVDNGISSHAGVEDAHRRGISVLVTDHHLPGETLPDADAMINPNLPDC
AFPSKALAGVGVAFYMMMALFVRLRDSDWFTQPLFTQQGLAKPNLAELLDLVALGTVADV
VPLDANNRILVAQGLNRIRAGECRPGIRALLEVANRDASQLVASDLGFAIGPRLNAAGRL
DDMTVGVELLLSNDITQARMLANDLDALNQDRREIEQGMQVEALRLCESLERTRTELPYG
LAMYHPEWHQGVVGILASRIKERFHRPVIAFAPAGDGMLKGSGRSIAGLHLRDALERLDT
LYPGMMDKFGGHAMAAGLSMHETQFEDFRQRFGELVGEWLEPSQLEGVVWSDGELALPEL
DLLSTAEMLRYAGPWGQAFPEPTFDGCFRILQPRLLKERHLKAMFEPIGATGTVPLLDGI
AFNIDTTVWPDPSIKEVEMVYRLDINEFRGKRSVQLMIQHLWPR
NT seq 1755 nt   +upstreamnt  +downstreamnt
atgattacccaactccgccggcgtccgctggcggaggatattgatttacctgataccgtt
ccgcccttattgcgtcgcctctatgcgcagcgcggcgttaaaggggctcaggagctggaa
cgtagtctgagtggtttactcaattaccgtttactcagcggcattgataaagcgatcgac
ctgctgcaactcgcgctggcagagaagcgttgcatcgtgattgtgggcgactttgatgct
gatggcgccaccagcaccacgcttgccgtactggcgttgcgcagcatgggcggcacgaac
gtaaaatatctggtgccgaaccgttttgaagatggttacgggctaagccccgccgtggtg
gcgcaagccgccgccttgggtgcggaacttatcgttactgttgataacggaatctcttcc
catgcgggtgtcgaggatgcccatcggcgcggtatttcagtgctagtgaccgatcaccat
ctgccgggcgaaaccctgcctgacgccgatgcgatgattaaccccaatctgccagattgt
gcattcccttccaaagcgctagctggcgtgggtgtggcgttttacatgatgatggcgctg
tttgtacgcctgcgtgacagcgactggtttacgcaacccttgtttacgcaacaaggtctg
gcgaagccgaatctcgctgaattactggatctggtggcgctgggcaccgtggctgacgtg
gtgccgctggatgccaacaaccggattttggtggcgcagggattaaatcgcattcgtgcg
ggcgagtgtcgtccgggtattcgagcgctgctggaagtagctaatcgcgatgccagtcaa
ctggtcgctagcgatttaggctttgctatcggacctcgcctcaatgccgccggacggctg
gatgatatgacggtcggggtcgaactgctattgagtaacgatattactcaagcgcgcatg
ttggctaacgatttagatgcattgaatcaggatcggcgcgaaatcgaacagggaatgcag
gtcgaagccctgcgcctgtgtgaatcgctggagcgtacccgtactgaattaccttacggt
ctggcgatgtatcacccagagtggcatcagggcgttgtgggtattctggcttcacgcatt
aaagagcgtttccatcgcccggtgattgcctttgcccccgctggtgacggcatgttgaaa
ggctcgggacgttccattgccggtctgcatcttcgtgatgcgctggaacgactcgatacg
ctataccccggcatgatggacaagttcggcggacacgcgatggcggcaggattatcgatg
catgaaacgcagttcgaggatttccgccagcgcttcggcgaattagtaggggagtggctc
gagccatctcagcttgaaggggtcgtctggtctgatggcgagctagcgctgccggaattg
gatttgctctcaacggcagaaatgctgcgctacgccgggccgtgggggcaagcattccct
gaaccgacattcgatggctgcttccgcattcttcaaccccgcttgctcaaagaacgccat
ttgaaagcgatgtttgaaccgatcggtgcaacaggaaccgtgccgctgttagatggcatc
gcgtttaatattgataccaccgtctggcccgatccgagcattaaagaagtggaaatggtg
taccggctggatattaacgaatttcgcggtaaacgctcggtgcaattgatgatccaacat
ctgtggccgcgctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (3)   
   Pfam (3)   
All databases (11)   

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