KEGG   Pectobacterium punjabense: E2566_05225
Entry
E2566_05225       CDS       T06530                                 
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
  KO
K03583  exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
Organism
ppuj  Pectobacterium punjabense
Pathway
ppuj03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ppuj00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    E2566_05225 (recC)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ppuj03400]
    E2566_05225 (recC)
Enzymes [BR:ppuj01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     E2566_05225 (recC)
DNA repair and recombination proteins [BR:ppuj03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     E2566_05225 (recC)
SSDB
Motif
Pfam: Exonuc_V_gamma RecC_C
Other DBs
NCBI-ProteinID: QJA19364
Position
1133367..1136765
AA seq 1132 aa
MFRIYHSNQLDILKELMVELIKRQPLADPFQQEVILVQSPGMAQWLQIELAGDFGIAANI
QFPLPGVFLWNMCRHVLSDIPKESAFSKDAMTWKLMHLLPDLLAQPDFAALNHYLQDDDN
QRKLHQLAGRVADLFDQYLIYRPEWIKAWQEGKQVDDLGGNQLWQSALWRALVDYTRDLA
QPEWHHAILYQRFINALDRAKVCPKGLPPRVFICGISALPPIYLQALNALARHIDVHLLF
TNPCRHYWSDIQDYKFLAKLKARNRRLHRFDGEQTDETRPLFRDLSQAETLFNDDGKQSI
NNPLLASWGKLGRDNLYLLAELDNVQEIDAFVESDGKNLLQTLQRDILELEDHAVVAVSH
ETQNSSTKKRRLALDDRSVDFHTCHSPQREVEVLHDRLLAMMADDPELMPRDVIVMMADI
DGYTPFIQAVFGNAPDNRYLPFAISDQRARHAHPALQAVISLLDLPTSRFTAEQVLALLE
VPALAARFGIQEEGLRRLRLWVVESGVRWGLDDDNVRDLMLPPTGQHTWRFGLTRMLLGY
AMDSQVGDWQGVLPYDESSGLIAELAGQLAELLMQIHQWRQRLSQSRVLVDWLPLCRELI
ETFFDADSETEAALALVEKQWQYVISMGTMAHYPQQVSISRLRDELSRRLDQERLSQRFL
AGSINFCTLMPMRSIPFKVVCLLGMNDGVYPRTLPPLGFDLMGRKIKRGDRSRRDDDRYL
FLEALLSAQNKLYISYIGRSIQDNTRRYPSVLVSELTEYIAQSYVLPGDEALDIDSSAER
VVKHLCREHTRMPFDANNFLSAPQPLSFAAEWLAAANRKGEAQPDFDREALSERAGDNHV
SLDDLKRFYRHPVRAFFQLRLGVSFMLHSDELLDEEPFVVDSLNRYQLNSELLNTLINEG
DTEKLYRRARAAGELPYGAFGEIYWQEQQQDMAQLAARVRDELTPMLSGSREVDIILDGV
RISGWLNQVQPDGLLRWRPGTLSMKDGITLWLEHLAYCAAGGQGESRLYGREDTAWRFAA
LSEAQAREQLAVMLDGYRQGMSKPLLLLNKAGSAWLAECYDRESDSLRSDEEVQNKARAR
LLQAWQGNMGMRGEGEDYYLQRIVRELDEKRMNEVVEAAQIWLLPPFRSNLA
NT seq 3399 nt   +upstreamnt  +downstreamnt
atgtttagaatctatcactccaaccagttggatatcttgaaagaactgatggttgagctg
ataaaacgtcagccgcttgcggaccctttccaacaggaagtgattttggtgcaaagccca
gggatggcgcagtggctgcaaattgaactggctggggattttggtattgctgccaatatc
caattcccattgcccggcgttttcttgtggaatatgtgtcgccatgtgctgtcagatatt
ccaaaagaaagtgccttcagcaaggatgcgatgacgtggaagctcatgcatttgctgcct
gatttactggcacagcctgattttgcggcgcttaatcactatttgcaggatgatgataac
cagcgcaagctgcatcaactggccgggcgcgtggcggaccttttcgatcaatacctgatt
tatcgccctgagtggatcaaagcatggcaagaggggaaacaggttgacgatctcggtggt
aaccaactttggcagtcggcgctgtggcgtgcgctggtggactacacacgtgatctagct
cagcctgaatggcaccatgcgattctgtaccaacgctttatcaacgcgttagatcgggca
aaagtgtgtccgaagggtctgccgccacgcgtttttatctgcggtatttcagcgctcccc
cctatctatctacaggcgttgaacgctctggcacgacacattgatgtgcacctattgttt
accaatccctgccgccattattggagtgacattcaggattataaatttctggcgaagcta
aaagcccgcaaccggcgcttacatcgctttgacggcgagcagacggatgaaactcgtcca
ctatttcgcgatctctcacaggcagaaacattgttcaatgacgacggtaaacagtcgatt
aataacccgttgctggcatcgtggggcaaactggggcgcgataacctttatctgctggct
gagctggataacgtgcaggagatcgatgcttttgttgagtcggatggcaaaaatctgctg
caaacgttgcagcgcgatattcttgaactggaagaccacgcggtcgtagccgttagtcac
gaaacacaaaacagcagcacgaaaaagcgtcggttggcgcttgacgatcgttcggttgat
tttcacacctgccatagtccgcagcgtgaggttgaagtgctgcacgatcggctgttggct
atgatggcggacgatcctgagctgatgccgcgtgatgtcattgtgatgatggcggacatt
gatggctatacgccgttcattcaggcggtgtttggcaacgcgccggataatcgctacctg
ccttttgccatctctgatcagcgcgcgcgacatgcgcatcccgcattgcaagcggtgatc
agcttgctggatttacccacaagccgttttacggcagagcaggttctggcattgcttgaa
gtgcccgcactggccgctcgtttcggtattcaggaagaagggttgcggcgcttgcgcctg
tgggtggtggagtcgggcgtccgttgggggttggatgacgacaacgtgcgcgatctgatg
ctgccaccaacgggtcagcatacgtggcgttttggcctgacgagaatgctgttgggctat
gcgatggacagtcaggtcggtgattggcagggggtactgccttacgatgagtctagcggt
ctgattgcggagctggccggccaactggctgaactgctgatgcagatccatcaatggcgc
cagcgtctgtctcaatcgcgcgtacttgtcgattggttaccgctttgtcgagagctgatc
gaaaccttctttgatgctgacagcgagaccgaagcggcgctggcattggttgaaaagcag
tggcaatacgtcattagcatgggcacgatggcgcattatccgcagcaagtgtcgatttcc
cgattgcgtgatgaactgtcacggcgtctcgatcaggagcgacttagccagcgctttttg
gccggatctatcaatttctgtacgctgatgccgatgcgttccatcccgtttaaggtcgtg
tgtttattgggcatgaacgatggtgtttacccacgaacgctcccgccgcttgggttcgat
ctgatggggcgaaaaatcaaacgtggtgatcgtagccgacgtgacgacgatcgctatctg
tttcttgaggcgctcttgtcggcgcagaacaagctttatatcagctatatcgggcgatcg
attcaggataatacgcgccgctatccttcagtattggtcagtgaactgacggaatatatt
gcacagagttatgtcctgccgggtgatgaagcattggatatcgatagcagtgcagaacgt
gtcgtgaagcacctctgccgtgaacatacccgtatgccttttgatgcgaataatttcctg
tcggcaccgcagccgttgagctttgcggcagaatggttggcggcggcgaaccgaaaagga
gaagctcagcctgattttgatcgcgaagcgctctctgaaagagcgggcgataaccatgtc
agtttggacgatctgaaacgtttctatcgtcaccctgttcgagccttctttcaactgcga
cttggtgtgagttttatgctgcacagtgacgaactgttggatgaagagccctttgtggtt
gatagccttaaccgctaccaattgaatagcgagctgcttaataccttgattaatgaaggt
gatacggaaaaactgtatcgtcgtgccagagccgcgggtgaactaccctatggcgcattc
ggtgaaatatactggcaggaacaacagcaggatatggcacaactggctgcgcgcgtgcgt
gatgagttaacgccaatgctgtcggggagccgggaagtcgacattatccttgacggtgta
cgcatcagcggctggctgaatcaggtgcagccggatggtttgttgcgctggcgtccaggt
acgctttccatgaaagatggtattacgctgtggctggaacatctggcttactgtgcggcg
ggcgggcagggagaaagtcgactgtatgggcgtgaagacactgcgtggcgctttgctgcc
ttatcggaagcgcaagccagagaacagctggccgtcatgttggatggctatcgtcaggga
atgagtaagccgctattactgctcaataaagcagggagtgcgtggttagctgaatgctat
gatcgtgaaagtgatagcctacggtcggatgaagaggtgcagaacaaagcacgtgcccgt
ttgctgcaagcctggcagggcaatatgggaatgcggggagaaggcgaagattattaccta
caacgcattgttcgtgaattggatgaaaaacgaatgaatgaagtggttgaagcggcacaa
atctggctactgccaccgttccgctctaatctggcttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (2)   
   Pfam (2)   
All databases (10)   

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