KEGG   Pectobacterium punjabense: E2566_05300
Entry
E2566_05300       CDS       T06530                                 
Name
(GenBank) ABC transporter ATP-binding protein
  KO
K02031  peptide/nickel transport system ATP-binding protein
K02032  peptide/nickel transport system ATP-binding protein
Organism
ppuj  Pectobacterium punjabense
Pathway
ppuj02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:ppuj00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    E2566_05300
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:ppuj02000]
    E2566_05300
Transporters [BR:ppuj02000]
 ABC transporters, prokaryotic type
  Peptide and nickel transporters
   Peptides/nickel transporter
    E2566_05300
SSDB
Motif
Pfam: ABC_tran AAA_21 SMC_N oligo_HPY AAA_22 AAA_16 Mg_chelatase AAA_29 NACHT AAA_25 ATP-synt_ab RsgA_GTPase AAA_5 DUF87 RNA_helicase AAA_7 PRK AIG1 tRNA_lig_kinase NB-ARC Hpr_kinase_C
Other DBs
NCBI-ProteinID: QJA19375
Position
complement(1155917..1157644)
AA seq 575 aa
MKPLVDIQDLRVDFPGHQAVRGLNLTINAGETLALVGESGCGKSATALSLMRLVAEPGKI
SGHILFDGHDLLTLPDRKMRQLRGSALSMIFQEPMTSLNPVLSIGQQISETLRLHEALTP
AQARARTIELLDLVKIPEPARRVDDYPHNLSGGQRQRVMIAMAVACRPRLLIADEPTTAL
DVTIQAQILALLDNLRREFSMSLLLITHDLGLVAQWADRVAVMYAGQKVEEAQAVDLFQS
STHRFAPKHSYTHGLLATSLHMDQDRHYRTHRLAEIHHAPTDGGADFTLLTPPSLIHRAT
DTNQQPLLSLKNIQTRYSTPQGKVLAVDDVSLTILPGETLGLVGESGCGKSTLSKTILRL
LPPSHGQIVFDGQDITTLKESRLKALRQRVQMIFQDPYASLNPRHSIQHILETALIVHGL
GDRPQRQQAINTIIDRVGLPQSSLNRYPHEFSGGQRQRIGIARALVVRPSLVICDEPVSA
LDVSIQAQILNLLVELKNEMGLSLLFISHDLAVVRYIADRVMVMQNGRCVESGDHHSIWH
QPQHPYTRKLIDAVPGGGQREASVSPQPMSRQAHG
NT seq 1728 nt   +upstreamnt  +downstreamnt
atgaagccgctggtcgatattcaagatttacgcgtcgattttcccggccatcaggccgtt
cgagggctaaacctgacgattaacgccggagaaacgctggcgctggtcggtgaatccggc
tgtggtaaatccgcaacggcgctgtccctgatgcgactggtcgccgaaccgggaaaaatc
agtggtcacattctgtttgacggacacgatctgcttaccctgccggatcgcaagatgcgt
caactgcgtggcagcgcgctgtcgatgatttttcaggaaccgatgacctcgctcaatccg
gtgctctctatcgggcaacaaattagtgaaaccctacggctgcatgaagcgctaacacct
gcacaggcaagggctcgcactatcgaactgttagatctggtcaagatcccagaaccggcc
agacgagtagatgactatccacataacctgtctggcggccagcgtcagcgcgtcatgatt
gccatggcggtggcgtgccgtccgcgcttgctgattgccgatgaaccaaccaccgcgctg
gacgtcactattcaggcacaaattctggcgctgctggataatttgcggcgtgaattctcg
atgagcctgctgctgattacccacgatcttggactggttgcacaatgggccgatcgtgtg
gcagtgatgtatgccgggcaaaaggtagaagaagcacaggcagttgacctgtttcagtca
tccacacaccgtttcgcccccaagcacagctacacgcacgggctgttagcaacatcgctg
cacatggatcaggacaggcattaccgtacgcatcggctggcggaaatccatcacgcaccg
acggacggaggcgccgattttacactgctgacgccacccagcttgattcaccgagctacc
gacacgaatcagcagccgctgctctcgctgaaaaatattcagacccgctattcaacacca
cagggcaaggtgctggcggttgacgatgtttcactgactattttacccggtgaaacgctc
ggtctggtgggcgaatccggctgtggcaaatcgaccctgtccaaaaccattctgcgtctg
ttaccaccgtcacacgggcagatcgtttttgatgggcaagacatcaccacgctaaaagaa
tcacggttgaaagcgttacgtcagcgggtacagatgatatttcaggacccctacgcctcg
ctgaacccacgccacagtattcagcatattcttgaaacagcgctgattgtgcacggcctt
ggcgatcgtccgcagcgacagcaggcgatcaacacgatcatcgatcgcgtcggtctgccg
caaagcagcctgaatcgctatccccatgagttttccggtgggcagcgtcagcgtatcggc
attgcccgtgcgctggtggtgcgtccttcattggtgatttgcgacgaacccgtatctgca
ctcgatgtctctattcaggcacaaattctcaatctgctggtggagttaaaaaacgaaatg
ggtctgtcgctgctgtttatttcccacgaccttgcagtggtgcgttatatcgccgaccgg
gtcatggtgatgcaaaacgggcgctgcgtggaaagcggcgatcaccacagcatctggcat
cagccacagcatccgtatacccgcaaactgatcgatgccgtccccggcggcgggcagcgc
gaagcgtctgtgtccccacagccgatgagcaggcaggcgcatggataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (2)   
   NCBI-PROTEINID (1)   
Protein domain (21)   
   Pfam (21)   
All databases (28)   

Download RDF
DBGET integrated database retrieval system