KEGG   Pseudomonas putida NBRC 14164: PP4_10850
Entry
PP4_10850         CDS       T02707                                 
Symbol
rapA
Name
(GenBank) RNA polymerase-associated protein RapA
  KO
K03580  ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
ppun  Pseudomonas putida NBRC 14164
Brite
KEGG Orthology (KO) [BR:ppun00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ppun03021]
    PP4_10850 (rapA)
Transcription machinery [BR:ppun03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    RNA polymerase-associated proteins
     PP4_10850 (rapA)
SSDB
Motif
Pfam: RapA_C Tudor_1_RapA Tudor_RapA Helicase_C SNF2-rel_dom ResIII DEAD
Other DBs
NCBI-ProteinID: BAN52938
Position
complement(1247503..1250349)
AA seq 948 aa
MAQQYQPGQRWISDSEAELGLGTILAQDGRLLTVLYPATGDTRQYSLRNAPLTRVRFSPG
DQITHFEGWKLTVREVDDIDGLMVYHGLDGQNQPRTLPETQLSNFIQFRLASDRLFAGQI
DPLSWFSLRYNTLQHTSKQMQSALWGLGGCRAQPIAHQLHIAREVADRSAPRVLLADEVG
LGKTIEAGLVIHRQLLSGRASRVLILVPENLQHQWLVEMRRRFNLQVALFDAERFIESDA
SNPFEDAQLALVALEWLVDDEKAQDALFAAGWDMMVVDEAHHLVWHEDQVSAEYGLVEQL
AQVIPGVLLLTATPEQLGQDSHFARLRLLDPNRFHDLAAFRAESEHYRPVAEAVQELLDE
GRLSPKAHATIQGFLGAEGEALLAAVSDGDSQASARLIRELLDRHGTGRVLFRNTRAAIQ
GFPERQLHPYPLATPEQYRDLPAGEHAELYPEVAFQAQGDVADDERWWRFDPRVDWLIDT
LKMLKRTKVLVICAHAETAMDLEDALRVRSGIPASVFHEGMNILERDRAAAYFADEEFGA
QVLICSEIGSEGRNFQFAHHLVMFDLPAHPDLLEQRIGRLDRIGQKHTIQLHIPYLLGSP
QERLFQWYHEGLNAFLNTCPTGNALQHQFGPRLLSLLEGGESKAWDSLVDDARSERERLE
AELHTGRDRLLELNSGGAGEGQALVEAILEQDDQFALPIYMETLFDAFGIDSEDHSENAL
ILKPSEKMLDASFPLGDDEGVTITYDRAQALSREDMQFLTWEHPMVQGGMDLVLSGSMGN
TAVALIKNKALKPGTVLLELLFVSEVVAPRSLQLGRYLPPAALRCLLDANGNDLASRVAF
ETLNEQLESVPRASANKFVQAQRDVLAKRISGGEEKIMPTHVERVAEAQRRLAAEADEEL
ARLVALQAVNPSVRDSEIDALRKQREDGLAMLDKAALRLEAIRVLVAG
NT seq 2847 nt   +upstreamnt  +downstreamnt
atggcgcagcagtatcaaccggggcaacgctggatcagcgacagcgaagcagagctcggc
ctgggtaccatcctggcgcaggatggccgcctgttgaccgtgctctacccggccactggc
gacacacgccagtattccctgcgcaacgcgccgctgacccgcgtgcgcttctcgccaggt
gaccagatcacccacttcgagggctggaagctgaccgtgcgcgaagtcgacgacatcgac
gggctgatggtctaccacggcctggacggtcagaaccagccgcgtaccctgccagaaacc
cagctgtcgaacttcatccagttccgcctggcaagtgaccggctgtttgcagggcaaatc
gaccccctgtcgtggttcagcctgcgctacaacaccctgcagcacaccagcaagcagatg
cagtcggcgctatggggcctgggtggctgccgcgcgcaaccaatcgcccaccagttgcac
atcgctcgcgaagtcgccgaccgcagcgccccgcgggtactgctggccgacgaagtgggc
ctgggtaaaaccatcgaggccggcctggtgatccatcgccaactgctctcgggccgcgcc
agccgcgtgctgatcctggtaccggaaaacctccagcaccagtggctggtggaaatgcgc
cgccgcttcaacctgcaagtggccctgttcgatgccgagcgctttatcgaaagcgacgcc
agcaacccgttcgaggatgcccagctggcgctggttgcactggaatggctggtcgacgac
gaaaaggctcaggacgcattgtttgccgctggctgggacatgatggtcgtcgacgaggcc
caccacctggtctggcacgaagaccaggtcagcgccgaatacggcctggtcgagcaactg
gcccaggtgatcccgggcgtgctgctgctcaccgccacccccgagcagcttggccaggac
agccacttcgcccgcctgcgcctgctcgaccccaaccgcttccacgacctggccgccttc
cgcgccgaaagcgagcactatcgcccggtggctgaagccgtgcaggagctgctcgatgaa
ggccgcctgtcgccaaaggcccacgccaccatccagggtttcctgggtgccgaaggcgaa
gccctgttggctgcagtcagcgacggcgacagccaggccagcgcacgtctgatccgcgag
ctgctggaccgccacggcaccggccgcgtcctgttccgtaacacccgtgcggcgatccag
ggcttccccgagcgccagttgcacccttacccgctggccacacccgagcagtaccgcgac
ctgccagccggcgagcacgccgagctgtacccggaagtcgccttccaggcccagggtgat
gtggctgacgacgagcgctggtggcgtttcgacccgcgcgtcgactggctgatcgacacc
ctgaagatgctcaagcgcaccaaggtactggtcatctgcgcgcacgccgaaaccgccatg
gacctggaagacgccctgcgcgtgcgctccggcatcccggcctcggtgttccatgaaggc
atgaacatcctcgagcgcgaccgcgccgccgcctacttcgccgacgaagaattcggtgcg
caagtgctgatctgctccgagatcggcagcgaaggccgcaacttccagttcgcccatcac
ctggtgatgttcgacctgccagcacacccggacctgctcgaacagcgcatcggccgcctc
gaccggatcggccagaagcacaccatccagttgcacatcccgtacctgctaggcagcccg
caagagcgcctgttccagtggtaccacgaaggccttaacgccttcctcaacacgtgcccc
accggcaacgcccttcagcaccagttcggcccacgcctgctgtcgctgcttgaaggtggc
gagagcaaggcctgggattccctggtggacgacgcccgcagcgagcgcgagcgcctggaa
gccgaactgcacactggccgcgaccgcctgctggagctcaactccggcggtgccggcgaa
ggccaggcgctggtcgaggccattctcgaacaggacgaccagtttgccctgccgatctac
atggaaaccctgttcgacgccttcggcatcgacagcgaagaccattccgagaacgccctg
atcctcaagccgagcgaaaagatgctcgatgccagcttcccgctgggcgacgacgaaggc
gtgaccatcacctacgaccgtgcccaggcgctgtcgcgcgaggacatgcagttcctcacc
tgggagcacccgatggtgcagggcggcatggacctggtgctgtccggctctatgggcaac
accgccgtggcactgatcaagaacaaagcactcaagccgggcaccgtcctgctcgaattg
ctgttcgtcagcgaggtggtggcaccacgcagcctgcagctgggccgctacctgccgccg
gccgcactgcgctgcctgctcgacgccaacggcaacgacctggcctcccgcgtggctttc
gaaaccctcaacgagcagctcgagagcgtaccgcgtgccagcgccaacaagttcgtccag
gcccagcgggacgtgctcgccaagcgcatcagtggcggtgaagagaagatcatgccgacg
cacgtcgagcgcgtagccgaagcgcagcgccgtctggcagccgaggccgacgaagagctc
gcccgcctggtggcactgcaagcggtcaacccaagcgtgcgcgacagcgaaatcgacgcc
ctgcgcaagcagcgtgaagacggcctggcgatgctggacaaggccgccttgcgcctggag
gccattcgcgtgctggtggctggctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (7)   
   Pfam (7)   
All databases (13)   

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