KEGG   Pseudomonas putida NBRC 14164: PP4_11310
Entry
PP4_11310         CDS       T02707                                 
Name
(GenBank) putative RNA-binding protein
  KO
K06182  23S rRNA pseudouridine2604 synthase [EC:5.4.99.21]
Organism
ppun  Pseudomonas putida NBRC 14164
Brite
KEGG Orthology (KO) [BR:ppun00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ppun03009]
    PP4_11310
Enzymes [BR:ppun01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.21  23S rRNA pseudouridine2604 synthase
     PP4_11310
Ribosome biogenesis [BR:ppun03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    PP4_11310
SSDB
Motif
Pfam: S4
Other DBs
NCBI-ProteinID: BAN52984
Position
complement(1306905..1307615)
AA seq 236 aa
MSEPVRLSKRLIEQLGCSRRDAELYIEGGWVTVDGVVVEQPQFKVEDQRVELLPGARVEA
LEPVTLLLNQAAGMDSESARASMNMATLSEAHREGVRALHGHFNRQACVAPLERGASGLQ
VFTQDWRVSRKIEADLRRLEQEFIVEVRGETTPQALERLARGATRNDRELPKAKASWQNE
THLRMVLKNPQPGQIAELCAYLRLELVSMRRIRLGGVSMGKLPLGQWRYVATTERF
NT seq 711 nt   +upstreamnt  +downstreamnt
atgtccgaacccgtccgcctgtccaaacgccttatcgagcaacttggctgctctcgccgc
gatgccgagctctatatcgaaggtggctgggtcacggtcgacggcgtggtggtcgagcag
ccgcagttcaaggtagaggaccagcgcgtcgagctgctcccgggtgcccgcgtcgaagcg
ctggagccggtaaccctgctgctcaaccaggcggccggcatggacagcgaaagcgcccgc
gccagcatgaacatggccaccctcagcgaggcgcaccgcgaaggcgtgcgcgccctgcat
gggcactttaaccgccaggcctgcgtggcaccgctcgagcgcggcgccagcggcctgcag
gtattcacccaggactggcgggtaagccgcaagatcgaggccgacctgcgtcgcctggag
caggagttcattgtcgaagtgcgcggcgagaccacacctcaggcgctggaacgcctggcg
cgcggcgccacgcgcaatgaccgcgagcttcccaaggccaaggccagttggcagaacgag
acccacctgcgcatggtgctgaaaaacccccaacccgggcagatcgccgagctgtgcgcc
tacctgcgcctggaactggtaagcatgcgacgcattcgcctgggtggtgtgtcgatgggc
aagttgcccctcggccaatggcgctacgtggcaactaccgaacgtttctaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (9)   

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