KEGG   Pseudomonas putida NBRC 14164: PP4_16140
Entry
PP4_16140         CDS       T02707                                 
Symbol
rnhA
Name
(GenBank) ribonuclease HI
  KO
K03469  ribonuclease HI [EC:3.1.26.4]
Organism
ppun  Pseudomonas putida NBRC 14164
Pathway
ppun03030  DNA replication
Brite
KEGG Orthology (KO) [BR:ppun00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    PP4_16140 (rnhA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ppun03032]
    PP4_16140 (rnhA)
Enzymes [BR:ppun01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.4  ribonuclease H
     PP4_16140 (rnhA)
DNA replication proteins [BR:ppun03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RNase H
    PP4_16140 (rnhA)
 Prokaryotic type
   Elongation factors (bacterial)
    RNase H
     PP4_16140 (rnhA)
   Elongation factors (archaeal)
     PP4_16140 (rnhA)
SSDB
Motif
Pfam: RNase_H TAF
Other DBs
NCBI-ProteinID: BAN53467
Position
1878596..1879042
AA seq 148 aa
MSDSVEMFTDGACKGNPGPGGWGVLMIYKGVEKELWGGERETTNNRMELMAAIQGLMSLK
RECEVVLTTDSQYVMKGINEWMVNWKKRGWKTAAKEPVKNADLWQQLDEQVNRHKVSWKW
VRGHIGHPGNERADQLANRGVDEVRAQR
NT seq 447 nt   +upstreamnt  +downstreamnt
atgagcgatagcgtcgaaatgtttaccgatggtgcctgcaaaggcaatcctggcccaggt
ggctggggggtcctgatgatctacaagggcgtcgagaaggaactgtggggcggcgagcgt
gaaaccaccaacaaccgcatggagctgatggcggcgatccagggcctgatgtcgctgaag
cgcgaatgcgaggtggtgctgaccaccgactcgcagtacgtgatgaagggcatcaacgaa
tggatggtcaactggaagaagcgcggctggaagaccgcagccaaggagccggtgaagaac
gccgacctgtggcagcagctcgatgagcaggtcaaccgccacaaggtgagctggaagtgg
gtgcgcggccatatcggccaccctggcaacgaacgcgccgaccagctggccaaccgtggg
gtcgatgaggtgcgcgcccagcgttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

Download RDF
DBGET integrated database retrieval system