KEGG   Pseudomonas putida NBRC 14164: PP4_19920
Entry
PP4_19920         CDS       T02707                                 
Symbol
soxA
Name
(GenBank) sarcosine oxidase alpha subunit
  KO
K00302  sarcosine oxidase, subunit alpha [EC:1.5.3.24 1.5.3.1]
Organism
ppun  Pseudomonas putida NBRC 14164
Pathway
ppun00260  Glycine, serine and threonine metabolism
ppun01100  Metabolic pathways
Module
ppun_M00975  Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:ppun00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    PP4_19920 (soxA)
Enzymes [BR:ppun01000]
 1. Oxidoreductases
  1.5  Acting on the CH-NH group of donors
   1.5.3  With oxygen as acceptor
    1.5.3.1  sarcosine oxidase (formaldehyde-forming)
     PP4_19920 (soxA)
    1.5.3.24  sarcosine oxidase (5,10-methylenetetrahydrofolate-forming)
     PP4_19920 (soxA)
SSDB
Motif
Pfam: GCV_T SO_alpha_A3 Fer2_4 GCV_T_C Pyr_redox_2 FAD_oxidored FAD_binding_2 NAD_binding_8 GIDA Pyr_redox_3 HI0933_like DAO Thi4 Pyr_redox FAD_binding_3 Lycopene_cycl AlaDh_PNT_C POPLD NAD_binding_7
Other DBs
NCBI-ProteinID: BAN53845
Position
complement(2266867..2269770)
AA seq 967 aa
MNSPTRLPVPMGLLIDRERPLRFEFDGQACQGFAGDTIASALLGNGRWLLSRSFKYHRPR
GPLSMAGQDANTLVQLPEEPNVLADLEAAREGQVVEGQNFNGSLTQDRDAYLGKFSRFMP
VGFYYRSFYKPKGMWKVWEPLIRKKAGLGVLDLGFKPQYYDKAYLFVDVAVIGGGPAGLR
AALDAANAGAKVLLIEQQPVLGGSLAYARFDIAGTRAASLRQELLATLEGHPNIQVLLEA
TCNGWFTDNYLPVIQHKRLYKVRASRCLVAAGSFDQPVVFRNNDLPGVMLTSAAQRLMKL
YAVKPGQRAVILTGHDDGYLAALDLQEQGVAVAAVVDMRAAPADAALAAELKRRDIPVHL
GSTVYEALHETGMRHVSGVDIRPITGQGKVGAHGLRLACDLLCMSAGYMPVYQLLCQAGG
KLAYDVNRDEFTLSHLPAGLDIAGSVNGRHSLANVLADATRGAADALAALGLQAPSQPVF
SAEAKVNFPWPIFPHPKGKDFVDFDEDLQVRDIVNATRSGYRDIQLVKRFSTVGMGPSQG
RHSALPTARLVAHATGRSISETGVTTARPPFQAEKLAHVAGRAFDPYRQTPMHRRHLQAG
AKMMPAGIWQRPAYYGKPEERERCMQEEARHVREKVGLIDVSTLGGLDVRGPDAAELLER
VYTFGFAKLPVGRTRYALMTNEQGVVIDDGVCARLGEQHFYVTATTSGVDRIYQQMLKWN
AQWRLNVDITNVTAALAAVNLAGPLSRQVLAKVCEDVDLSAEAFPYLGVRQGEVAGISAR
ILRVGFVGELGYEVHVPARHAERLWDALMQAGTDLGIRPFGVETQRLLRLEKGHVIISQD
TDGMTHPAEIDMQWAIGRKKPFFIGKRSIEILEAQPLKRKLVGFTLPQGSPQPLEGHLVL
DGLDITGNVTSCEYSQTLGQIIGLAYAGAHQATPGTHIPIRVEGGAMVHAKVVQLPFHDP
DNLRQEL
NT seq 2904 nt   +upstreamnt  +downstreamnt
atgaacagccctacccgcctccccgtgcccatgggcctgctgatcgaccgcgagcggccc
ctgcgcttcgagttcgacggccaggcctgccaaggctttgccggtgacaccattgccagc
gccctgctgggtaacggccgctggctgctgtcgcgctcgttcaaataccatcgcccacgc
ggcccgctgagcatggccggccaggacgccaacaccttggtgcaattgcctgaagaaccc
aacgtgctggccgacctggaagccgcccgcgagggccaggtggtcgaagggcagaacttc
aacggcagcctgacgcaggaccgtgacgcctacctgggcaagttctcacgcttcatgccg
gtgggcttctactaccgctctttctacaagcccaagggcatgtggaaggtatgggagccg
ctgattcgcaagaaggccggcctgggcgtgctcgaccttggcttcaagccgcagtactac
gacaaagcctacctgttcgttgatgtggcggtcatcggcggcggccccgccggcctgcgc
gccgcgctggacgcggccaatgccggggccaaggtgctgctgatcgaacaacagcctgtg
ctgggtggctcgcttgcctacgcccgcttcgacatcgccggcacccgcgccgccagcctg
cgccaggagctgctggccaccctcgagggccacccgaacatccaggtgctgctggaggcc
acctgcaacggctggttcaccgacaattacctgccggtgatccagcacaagcgcttgtac
aaggtacgcgccagccgttgcctggtggcggccggttcgttcgaccagccggtggtgttc
cgcaacaacgacctgccgggggtgatgctgaccagcgccgcccagcggctgatgaagctg
tacgcggtcaagccgggccagcgcgcggtgatcctcaccggccacgatgatggctacctg
gccgccctcgacctgcaggagcaaggcgtggctgtggctgccgtggtcgatatgcgcgcc
gcgccagccgatgccgcactggctgccgaactgaagcgccgcgatattcccgtgcacctg
ggcagcacggtgtacgaagcgctgcacgaaacaggcatgcgccatgtcagcggggtggac
attcgcccgatcaccggccagggcaaggtcggcgcgcatggcctgcgcctggcctgcgac
ttgctgtgcatgtcggcgggctacatgccggtgtatcagttgctgtgccaggccggtggc
aagctggcttatgacgtcaaccgtgacgagttcaccctcagccacctgccggccgggctg
gatatcgctggctcggtaaacggccgtcactcgctggcaaacgtgctggccgatgccaca
cgcggggccgccgatgcactggcagcgctgggcctgcaagcgccgtcgcagcctgtgttc
agcgccgaagccaaggtcaatttcccctggccgattttcccgcaccccaaaggcaaggat
ttcgtcgacttcgacgaagacctgcaagtgcgcgacatcgtcaacgccacccgcagtggc
taccgtgacatacaactggtcaagcgcttctccacggtcggcatgggcccgtcccaaggg
cgccactcggcgctgcccactgcacgcctggtcgcccatgccactggccgcagcatcagc
gagaccggggtgaccaccgcgcgcccaccgttccaggccgaaaaactggcgcatgtcgcc
ggtcgtgccttcgacccgtaccggcaaacacccatgcaccgtcgccacctgcaagccggg
gcgaaaatgatgcctgccggtatctggcaacgtccggcttattacggcaagccagaggaa
cgtgagcgctgcatgcaggaagaagcccgccatgtgcgggaaaaagttggcctgatcgac
gtttctactctgggcggcctggacgtacgcggccccgacgctgcagaactgctggagcgc
gtatacaccttcggctttgccaagctgcctgtcggccgcacccgctatgcgctgatgacc
aacgaacagggcgtggtgatagacgacggcgtctgtgcacgcctgggcgagcaacacttc
tatgtcaccgccactaccagcggtgtcgaccgcatctaccaacagatgctgaagtggaac
gcgcagtggcgcctgaacgtggacatcaccaacgttaccgccgccctggccgccgtcaac
ctggccgggccactgtcacgccaggtgctggccaaggtgtgcgaagacgtggacctgtcg
gcagaagccttcccctacctcggcgtacgccagggcgaggtggctggcatttcggcgcgc
atcctgcgggtgggtttcgtcggtgaactgggctatgaagtgcatgtgccggcgcgccat
gccgaacgcttgtgggacgccctgatgcaagccggtacggacctgggtattcgcccgttc
ggtgtcgagacccagcgcctgctgcgcctggaaaaaggccatgtgatcattagccaggac
accgacggcatgacccacccggcagagatcgacatgcagtgggccatcggccgcaagaag
ccgttcttcatcggtaagcgttccatcgaaatccttgaggcgcagccgctcaagcgcaag
ctggtcggcttcaccctgccacagggcagcccgcagccacttgaggggcacctggtactg
gacgggctggacatcaccggcaatgtcacttcctgcgagtactcgcaaaccttggggcaa
atcatcggcctggcctatgccggcgcccaccaggccacccccggcacgcacatcccgatc
cgcgtggaaggcggcgcgatggtgcacgccaaggtggtgcaactgccgttccacgatccc
gacaacctgcgccaggagctctga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (2)   
   KEGG MODULE (1)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (4)   
   KEGG ENZYME (2)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (19)   
   Pfam (19)   
All databases (40)   

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