KEGG T02706: L483

Pseudomonas putida H8234: L483_17955

Entry

L483_17955        CDS       T02706

Name

(GenBank) excinuclease ABC subunit A

K03701

excinuclease ABC subunit A

Organism

pput Pseudomonas putida H8234

Pathway

pput03420

Nucleotide excision repair

Brite

KEGG Orthology (KO) [BR:pput00001]
09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    L483_17955
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pput03400]
    L483_17955
DNA repair and recombination proteins [BR:pput03400]
Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     L483_17955
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      L483_17955

SSDB

Motif

Pfam:

ABC_tran UvrA_DNA-bind AAA_21 nSTAND1 SMC_N DnaJ_CXXCXGXG AAA_16 AAA_29 AAA_25 RsgA_GTPase

Other DBs

NCBI-ProteinID:

AGN79283

Position

3780661..3783177

AA seq 838 aa
MPSRPTSPSGFVRVRGAREHNLKNIDVDVPRDALVVFTGVSGSGKSSLAFSTLYAEAQRR
YFESVAPYARRLIDQVGVPDVDAIDGLPPAVALQQQRGTPSARSSVGSVTTLSSSIRMLY
SRAGHYPDGQAMLYAEDFSPNTPQGACPECHGLGRVYEVTEATMVPDPSLTIRERAVAAW
PMAWQGQNQRDILVTLGYDVDIPWRDLPQAQRDWILFTEDTPTAPVYAGLTPAQTREALK
RKQEPSYQGTFMGARRYVLHTFMHSQSAQMRKRVAQFMRPSPCPLCQGKRLKREALGVTF
AGLDIAELSHLSLQALAEVFRKVAAAGYLTHQQDELTLEKRLAAQRIANELLERIDTLLD
LGLGYLALERSTPTLSSGELQRLRLATQLNSQLFGVIYVLDEPSAGLHPADSEALFEALQ
RLKHAGNSVYVVEHDLDTMRRADWLVDVGPAAGEHGGTILYSGPPAGLAEVEPSRTRAYL
FSAPTHTMREPRPARDWLKLEGITRNNLNNLSAAFPLGCFTAVTGISGSGKSSLVSQALL
ELVGAHLGHAEQRSEAEEQSLEDAPELASSGHVSAGLGSIKRLVQVDQKPIGRTPRSNLA
TYTGLFDHVRKLFAATDQAKAKGFDAGRFSFNVAKGRCANCEGEGFVSVELLFMPSVYAP
CPTCHGARYNPETLAVSWQGMNIAQVLQLTVDQALQVFAEQPPARRCLQVLQDIGLGYLR
LGQPATELSGGEAQRIKLATELQRTARGATLYVLDEPTNGLHPQDIDRLLVQLNRLVEAG
HSVVVVEHDMRVVAQSDWVIDIGPGAGDAGGKVVVSGPPKVVAACADSRTAAFLAKAL

NT seq 2517 nt +upstreamnt +downstreamnt
atgccttcacgcccaacctcccccagcggcttcgtccgcgtacgcggtgcccgcgagcac
aacctgaagaacatcgatgtggatgttccacgcgatgccttggtggtattcactggcgtc
tccggctcgggcaagtcctcgctggccttttccacgctttatgccgaagcccagcgccgc
tacttcgagtcggtggcgccctatgcccggcgccttatcgatcaggttggcgtgcccgac
gtcgatgccatcgacggcctgccgccggcggtagccctgcagcagcaacgcggcacgcca
agcgcacgttcctcggtgggcagcgtaaccaccttgtccagctcgatccgtatgctgtac
tcgcgcgccggccactacccggacgggcaagcgatgctgtacgccgaggacttttcgccg
aatacgccccagggcgcctgcccagagtgccatggcttgggccgggtctacgaggtgacc
gaagcaaccatggtccccgacccgtcgctgaccatccgcgagcgtgcggtggcggcgtgg
cccatggcctggcaaggccagaaccagcgcgacatcctggtgacgttgggttatgacgtt
gacattccctggcgcgacctgccgcaggcgcagcgcgactggatcctgttcaccgaggac
acgcccaccgcccccgtttatgccggcctgaccccggcgcaaacccgtgaagcgctaaag
cgcaaacaggagcccagctaccagggcacgttcatgggcgcccgacggtacgtgctgcat
accttcatgcactcgcaaagcgcacagatgcgcaagcgcgtggctcaattcatgcgcccc
agcccctgcccgctgtgccagggcaaacgcctgaagcgcgaagcgctgggcgtgaccttt
gcagggctggatatcgccgagctgtcgcacctgtcattgcaagcgctggccgaggtattt
cgcaaggtggcagcagcgggctacctgacacaccagcaagacgagctgaccctggaaaag
cgcctggcagcccaacgcatcgcaaacgagttgctcgaacgcatcgataccctgctcgac
cttggcctcggctacctggccctggagcgcagcaccccgaccctgtcttctggtgaactg
caacgcctgcgcctggccacccagctgaattcgcagctgttcggcgtgatctacgtactc
gacgagccgtcggccggcttgcaccctgccgacagcgaagcgctgttcgaagccctgcag
cgcctgaagcacgcgggcaactcggtgtatgtggtggagcacgacctggacaccatgcgc
cgcgccgactggctggtggatgtcgggccagctgccggcgagcatggcggcaccatcctc
tacagcgggccacccgcaggcctggccgaggtcgagccgtcacgcacacgcgcctacctg
ttcagtgccccgacccacaccatgcgtgaaccccgaccggcccgcgactggctgaagctt
gaaggcatcacccgcaacaacctgaataacctcagcgcggcatttccgcttggctgcttt
accgccgtcaccggtatttccggctcgggcaagtccagcctggtcagccaggccctgctg
gaactggtgggcgcgcacctgggccatgccgagcagcgcagcgaagccgaagagcaaagc
ctggaagacgcacctgaactggccagcagcggccatgtgagtgcgggccttggcagcatc
aagcgcctggtgcaggtcgaccagaaaccgatcggccgcacgccacgctccaacctggct
acctacacgggcctgttcgaccatgtgcgcaagctgttcgctgccacagaccaggccaag
gccaagggcttcgacgccgggcgcttttccttcaatgttgccaagggccgttgcgccaac
tgcgagggcgaaggtttcgtcagcgtcgagctgctgttcatgcccagtgtctacgcacct
tgccccacctgtcatggcgcccgctacaaccccgaaaccctggcggtgagctggcaaggc
atgaacatcgcccaagtgctgcaactgacggtcgaccaggccctgcaggtatttgccgaa
cagcccccggcgcgccggtgcttgcaagtgcttcaggatatcggcttgggctacctgcgc
ctgggccaaccggccaccgaactgtccggtggcgaagcgcagcgcatcaagctggccacc
gaactgcagcgcacggcccgtggggcaaccctgtacgtgctggatgagcccaccaatggc
ttgcacccgcaagacatcgaccggctgctggtgcagttgaaccgcctggtcgaagccggg
cacagcgtggtggtggtcgaacatgacatgcgcgtggtggcgcagagcgactgggtgatc
gacatcgggccaggggccggagacgccgggggcaaagtagtggtcagcgggccgcccaag
gttgtggccgcgtgtgccgacagccgcacagcggcgttcttggccaaagccttgtag

All links

Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (10)   
   Pfam (10)   
All databases (17)   

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