KEGG   Pseudomonas putida H8234: L483_23290
Entry
L483_23290        CDS       T02706                                 
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
  KO
K00239  succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
Organism
pput  Pseudomonas putida H8234
Pathway
pput00020  Citrate cycle (TCA cycle)
pput00190  Oxidative phosphorylation
pput00650  Butanoate metabolism
pput01100  Metabolic pathways
pput01110  Biosynthesis of secondary metabolites
pput01120  Microbial metabolism in diverse environments
pput01200  Carbon metabolism
Module
pput_M00009  Citrate cycle (TCA cycle, Krebs cycle)
pput_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
pput_M00149  Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:pput00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00020 Citrate cycle (TCA cycle)
    L483_23290 (sdhA)
   00650 Butanoate metabolism
    L483_23290 (sdhA)
  09102 Energy metabolism
   00190 Oxidative phosphorylation
    L483_23290 (sdhA)
Enzymes [BR:pput01000]
 1. Oxidoreductases
  1.3  Acting on the CH-CH group of donors
   1.3.5  With a quinone or related compound as acceptor
    1.3.5.1  succinate dehydrogenase
     L483_23290 (sdhA)
SSDB
Motif
Pfam: FAD_binding_2 Succ_DH_flav_C Pyr_redox_2 DAO GIDA HI0933_like FAD_binding_3 Thi4 Pyr_redox_3 FAD_oxidored
Other DBs
NCBI-ProteinID: AGN79840
Position
complement(4877733..4879505)
AA seq 590 aa
MASIPTISFDAIIIGGGGAGMRAALQLAQGGHKTAVVTKVFPTRSHTVSAQGGITCAIAS
ADPNDDWRWHMYDTVKGSDYIGDQDAIEYMCQEGPAAVFELDHMGLPFSRTETGRIYQRP
FGGQSKDFGKGGQAARTCAASDRTGHALLHTLYQGNLKAGTTFLNEYYAVDLVKNQEGAF
VGVIAICIETGETMYIKSKATVLATGGAGRIYASTTNALINTGDGIGMALRAGVPVQDIE
MWQFHPTGIAGAGVLVTEGCRGEGGYLINAHGERFMERYAPNAKDLAGRDVVARSMVKEI
IAGNGVGPNKDHVLLKLDHLGEEVLHSRLPGICELSKTFAHVDPVVAPVPVVPTCHYMMG
GVATNIHGQAITMDEEGKDHIIPGLFAVGEVACVSVHGANRLGGNSLLDLVVFGRAAGLH
LEKALSDGIEHLDASDTDIEVALNRLNKLNERSTGEDVASLKRELQSCMQNYFGVFRTGE
YMLKGIEQLAGLRDRIANVKINDKSQAFNTARIEALELQNLLEVAEATAIAAEARKESRG
AHAREDFEDRDDENWLCHTLYYPGEKRVAKRGVNFAPKTVPAFEPKIRTY
NT seq 1773 nt   +upstreamnt  +downstreamnt
atggctagcattccaaccatctcattcgacgccatcatcatcggtggcggcggcgccggc
atgcgtgctgcgctgcaactggctcaaggcggccacaagactgccgtagtcaccaaggtc
ttcccgacccgctcgcacactgtatccgcccagggcggcatcacctgcgccatcgcttcg
gctgacccgaacgacgactggcgctggcacatgtacgataccgtcaaaggttccgactac
atcggtgaccaggacgctatcgaatacatgtgtcaggaaggcccggctgcggtcttcgaa
ctggaccacatgggcctgccgttctcgcgtaccgaaaccggccgtatctaccagcgtccg
ttcggtggccagtccaaggacttcggtaaaggtggccaggccgcccgtacttgtgccgct
tccgaccgtaccggtcacgcgctgctgcacaccctgtaccagggcaacctgaaagccggt
accaccttcctcaacgagtactacgccgttgatctggtaaagaaccaggaaggcgctttt
gtcggtgtgatcgcgatctgcatcgaaaccggcgaaaccatgtacatcaagtccaaggcc
accgttctggccactggcggtgcaggccgtatctacgcctccaccaccaacgccctgatc
aataccggtgacggtattggtatggccctgcgtgccggtgtaccggtgcaggacatcgag
atgtggcagttccacccgaccggcatcgccggcgccggtgtactggtcaccgaaggctgc
cgcggtgagggtggctacctgatcaacgcccacggcgagcgcttcatggagcgttacgcg
ccgaacgcgaaagacctggccggccgcgacgtggttgcccgttccatggtcaaggaaatc
atcgccggcaacggcgtgggcccgaacaaggaccacgtactgctgaagctggaccacctg
ggcgaggaagtgctgcacagccgcctgccaggtatctgcgagctgtccaagaccttcgcc
cacgtcgacccggtcgtcgcgccggtgccggtcgttccgacctgccactacatgatgggc
ggcgttgccaccaacatccatggccaggccatcaccatggacgaagaaggcaaggatcac
atcatccctggcctgttcgccgtaggtgaagtggcgtgcgtatcggttcacggtgccaac
cgcctgggcggcaactcgctgctcgacctggtggtgttcggccgtgcagccggtctgcac
ctggagaaggcgctgagcgatggtatcgagcacctcgacgccagcgacaccgacatcgaa
gttgccctgaaccgcctgaacaagctcaacgagcgctccactggcgaagacgttgccagc
ctcaagcgcgagctgcagagctgcatgcagaactacttcggtgtattccgtactggcgaa
tacatgctgaagggtatcgagcagctggccggcctgcgtgaccgcatcgccaacgtcaag
atcaacgacaagtcccaggccttcaacaccgcgcgtatcgaagcgctggagctgcagaac
ctgctggaagtcgccgaagctaccgccatcgcggccgaagcccgtaaagagtcccgcggc
gctcacgcccgtgaagacttcgaagaccgtgacgacgaaaactggctgtgccacaccctg
tactacccgggtgagaagcgcgttgccaagcgtggcgtcaactttgcgccgaagaccgta
ccggccttcgagccaaaaatccggacttactaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (13)   
   KEGG PATHWAY (7)   
   KEGG MODULE (6)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (10)   
   Pfam (10)   
All databases (35)   

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