KEGG   Pseudomonas putida H8234: L483_31315
Entry
L483_31315        CDS       T02706                                 
Name
(GenBank) diaminopimelate decarboxylase
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
pput  Pseudomonas putida H8234
Pathway
pput00300  Lysine biosynthesis
pput00470  D-Amino acid metabolism
pput01100  Metabolic pathways
pput01110  Biosynthesis of secondary metabolites
pput01120  Microbial metabolism in diverse environments
pput01230  Biosynthesis of amino acids
Module
pput_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:pput00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    L483_31315
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    L483_31315
Enzymes [BR:pput01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     L483_31315
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC Ala_racemase_N
Other DBs
NCBI-ProteinID: AGN81087
Position
6640335..6641582
AA seq 415 aa
MNAFNYRDGQLFAEGVALSAVAERFGTPTYVYSRAHIEAQYRNYADALQGTEHLVCFAVK
ANSNLGVLNVLARLGAGFDIVSGGELERVLAAGGRADRVVFSGVGKTREDMRRALEVGVH
CFNVESTDELERLQVVAAEMGKVAPVSLRVNPDVDAGTHPYISTGLKENKFGIAIADAEA
IYVRAAQLPNLEVVGVDCHIGSQLTTVEPFLDALERLLDLVDRLADCGIHLRHLDLGGGV
GVRYRDEEPPLVADYIKAIRERVGTRDLALVFEPGRYIVANAGVLLTRVEYLKHTEHKDF
AIIDAAMNDLIRPALYQAWMGVSPVVPREGEGRAYDLVGPICETGDFLGKDRVLNLAEGD
LLAVQSAGAYGFVMSSNYNTRGRCAEILVDGDQAFEVRRRETIAELYAGESLLPE
NT seq 1248 nt   +upstreamnt  +downstreamnt
atgaacgctttcaactaccgcgacggccagctgttcgcggaaggggtggccctgtcggcc
gtcgccgaacgtttcggcacccccacctacgtgtactcgcgcgcccacatcgaggcccag
taccgtaactacgccgatgccctgcaaggcaccgagcacctggtgtgcttcgcggtcaag
gccaactccaaccttggcgtgttgaacgtactggcgcgcctgggcgcaggtttcgacatt
gtctccggtggtgagctggagcgcgtgctggccgctggcgggcgcgccgaccgcgtggtg
ttctctggcgtcggcaaaacccgcgaagacatgcgccgcgccctggaagtgggtgtgcac
tgcttcaacgtcgaatccaccgacgaactggagcgtttgcaagtcgtggcagccgagatg
ggcaaggttgccccggtgtcgctgcgggtcaacccggacgttgacgccggtacccacccg
tacatctccaccggccttaaagaaaacaagttcggcatcgccattgccgacgccgaggcc
atctacgtgcgtgccgcgcagttgccgaacctggaagtggttggcgtcgactgccacatc
ggctcccagttgaccaccgttgagccgttcctcgatgccctggagcgcctgctggacctg
gtcgaccgccttgccgactgcggcatccacctgcgccatctggacctgggtggcggcgtt
ggcgtgcgctaccgcgacgaagaaccaccgctggtggccgactacatcaaggctattcgc
gaacgcgtaggcacgcgcgacctggctttggtgttcgagccgggccgctacatcgtggcc
aacgctggcgtgctgctgacccgcgtggaatacctcaagcacaccgaacacaaagacttc
gccatcatcgatgcggcgatgaacgacctgattcgccctgcgctttaccaggcctggatg
ggtgtaagcccggtcgtgccacgcgagggtgaaggccgtgcctacgacctggtcggcccg
atctgcgagaccggcgacttcctcggcaaggaccgtgtgctgaacctggccgaaggcgat
ctgctggccgtgcagtccgcgggcgcctatggttttgtcatgagctccaactacaacacc
cgtggccgttgcgctgaaatcctggtcgacggcgaccaggcgttcgaagtacgccgccgc
gaaaccatcgccgaactgtacgctggcgaaagcctgctgccggagtaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (10)   
   KEGG PATHWAY (6)   
   KEGG MODULE (4)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (24)   

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