KEGG   Pseudomonas sp. UW4: PputUW4_01459
Entry
PputUW4_01459     CDS       T02357                                 
Name
(GenBank) RNA pseudouridylate synthase family protein
  KO
K06177  tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
Organism
ppuu  Pseudomonas sp. UW4
Brite
KEGG Orthology (KO) [BR:ppuu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ppuu03009]
    PputUW4_01459
   03016 Transfer RNA biogenesis [BR:ppuu03016]
    PputUW4_01459
Enzymes [BR:ppuu01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.28  tRNA pseudouridine32 synthase
     PputUW4_01459
    5.4.99.29  23S rRNA pseudouridine746 synthase
     PputUW4_01459
Ribosome biogenesis [BR:ppuu03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    PputUW4_01459
Transfer RNA biogenesis [BR:ppuu03016]
 Prokaryotic type
  tRNA modification factors
   Psudouridine synthases
    PputUW4_01459
SSDB
Motif
Pfam: PseudoU_synth_2
Other DBs
NCBI-ProteinID: AFY18665
UniProt: K9NHH6
Position
1694611..1695501
AA seq 296 aa
MSTSSFSAAHSQASTLYLPPGPWLTVVDCLCEHFSAIGREQWLDRIARGRVLDGQGMPIA
LDLAYREGLRIHYFREVPDEKPIPVIESILYADEHLVVADKPHFLPVTPAGEYVEQTLLR
RLIRRLDNPHLVPLHRIDRHTAGLVLFSANPQSRSAYQSLFPTRQIEKRYEAIAAALPEL
AFPLVHKSRLVDGEPFFRMQEGPGACNTETAIEVREKQEKLWRYGLYPVTGKKHQLRVHM
AALGAAICNDPFYPEVLKDAQDDYANPLKLLAQGLRFIDPVTGQERVFESEITLQW
NT seq 891 nt   +upstreamnt  +downstreamnt
atgtccacttcttctttttccgcggcacacagccaggccagtacgctgtacttgccacct
ggcccgtggctgaccgttgtcgattgcctgtgcgagcatttcagcgccattggtcgggaa
caatggctggacagaatcgcccgtggccgggtcctcgatgggcagggcatgccgattgcc
ctcgatttggcctacagggaaggtttgcggattcattattttcgcgaagtgccggatgaa
aagccgatcccggtgatcgagtcgattctgtacgcggacgagcatctggtggtggccgac
aaaccgcactttctgccggtgacgccggctggtgaatacgtcgaacagacgctgctcagg
cgcttgatccgtcgcctggacaatccgcatctggtgccattgcatcgcatcgaccggcat
accgcagggctggtactgttttccgccaatccacagagtcgttcggcttatcagtcgttg
tttccaacccggcagatcgaaaagcgttatgaggccatcgcagcggcgttgcctgaactt
gccttcccgctggttcataaaagccggctggtcgatggcgagccattcttccgcatgcag
gaagggcctggggcctgcaacaccgagacggcgatcgaagtcagggagaaacaggagaaa
ctctggcggtatggtctttacccggtgacgggcaagaaacatcagttgcgggtacacatg
gcggcgttgggcgccgctatctgcaacgacccgttttaccccgaggtgctcaaggatgcg
caggatgactacgccaatcctttgaagctgctggcccaggggctgagattcatcgatccg
gtcacaggccaggagcgagtgttcgagagtgaaattaccctgcaatggtga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (12)   

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