KEGG   Pseudomonas sp. UW4: PputUW4_03088
Entry
PputUW4_03088     CDS       T02357                                 
Name
(GenBank) type VI secretion protein
  KO
K11893  type VI secretion system protein ImpJ
Organism
ppuu  Pseudomonas sp. UW4
Pathway
ppuu02025  Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:ppuu00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02025 Biofilm formation - Pseudomonas aeruginosa
    PputUW4_03088
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:ppuu02044]
    PputUW4_03088
Secretion system [BR:ppuu02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   PputUW4_03088
SSDB
Motif
Pfam: T6SS_VasE
Other DBs
NCBI-ProteinID: AFY20283
UniProt: K9NM92
Position
complement(3629777..3631132)
AA seq 451 aa
MKIDRPLWAAGALLSPQQFQQQARWEAWANERLARLSLVHPWGVQDVAFDLHALRLGKLK
ATRLSLRMPDGTLIDTDHVDRLPLGLELSRLLSDDTQAATLLLALPLEQANGNNCLFDAD
KADRPTRYRQDWRQVQDIYADEVQSVGVLEYVLSLRFDHDENGDYLTCPIARLVRDGQGA
WSLDPDYVPPLLSFAAHPGLLTQLDNLLTQLSSKRQRLMGMRRESNQRMADFAVADVSLF
WLLNALNTYQPVLADLKAWPARHPEQVYLELTKLAGSLLTFSLEHDVEQIPPYRHEHLES
VFPPLLRMISTLLEASLPSRVIALTLEQSAANRWQVRLDDARLREPDSADFYLSVRCRLP
AVQLQSQFPQLCKIGTPDEVDHLVNAALDGVPLQSLSHVPAAIPLRLENQYFALDLNHAK
GQAIRDQGICALYVPSTLAEVKLELFAVLRA
NT seq 1356 nt   +upstreamnt  +downstreamnt
atgaaaatcgaccgccccttgtgggccgcgggggcattgctgtccccgcagcaattccag
cagcaggcgcgctgggaagcctgggccaacgagcgtctggctcgtctgtccctggtgcac
ccctggggcgtccaggacgtcgcgtttgacctgcacgcactgcgcctgggcaagctcaag
gccactcgcctgagcctgcgcatgcccgacggcaccttgatcgacaccgaccatgtggat
cgactgcccctggggctggagctgtcgcgcctgctgtccgacgatacccaggcggcgacc
ttgctcctggccttgccactggaacaggccaatggcaacaactgcctgttcgacgccgac
aaggccgatcgacccacccgttatcgccaggactggcgtcaggtgcaggacatttacgcc
gatgaagtgcaatcggtcggcgtactggaatacgtgctgagcctgcgcttcgatcacgac
gagaacggcgattacctgacctgcccgatcgcgcgcctggtacgtgacgggcagggcgcc
tggagccttgatcctgactatgtaccaccgctgctcagtttcgcggcgcacccgggtctg
ttgacgcaactggacaacctgttgacccagttgtcctccaagcgtcagcggctgatgggc
atgcgccgtgagagtaaccagcgaatggccgacttcgccgtggccgacgtgtcgttgttc
tggttgctcaatgccttgaacacctaccagccggtattggccgatctcaaggcctggccg
gcgcgacatcccgagcaggtctatctggagctgacaaaactggccggcagtctgctgacc
ttttcgctcgaacacgatgtcgagcagattccgccttatcgccacgaacacctggaaagc
gtgttcccgccgctgttgcgcatgatctccacgttgctggaggccagcctgccttctcgc
gtcatcgccctgacactcgagcagagcgcagccaaccgttggcaggtccgacttgacgac
gcccgtttgcgcgagcccgacagcgccgacttctatctgtcggtgcgttgccgcttgcca
gccgtgcaattgcagagtcagttcccgcaactgtgcaagatcggcacaccggacgaagtc
gatcacctggtcaacgccgccctcgatggcgtgccgttgcagtccctcagtcatgtcccg
gcggccatccccttgcgtctggaaaaccagtacttcgccctggatctcaaccatgccaag
ggacaagccattcgggaccagggtatctgtgccttgtacgtcccgagcaccctggccgaa
gtgaaacttgaactgttcgcggtactacgcgcatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (9)   

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