KEGG   Pseudomonas sp. UW4: PputUW4_03647
Entry
PputUW4_03647     CDS       T02357                                 
Symbol
sigX
Name
(GenBank) RNA polymerase sigma factor SigX
  KO
K03088  RNA polymerase sigma-70 factor, ECF subfamily
Organism
ppuu  Pseudomonas sp. UW4
Brite
KEGG Orthology (KO) [BR:ppuu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ppuu03021]
    PputUW4_03647 (sigX)
Transcription machinery [BR:ppuu03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     PputUW4_03647 (sigX)
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4 Sigma70_r4_2 Sigma70_ECF
Other DBs
NCBI-ProteinID: AFY20839
UniProt: K9NM50
Position
complement(4237729..4238319)
AA seq 196 aa
MNKAQSLSMRYDPRELSDEELVARSHTELFHVTRAYEELMRRYQRTLFNVCARYLGNDRD
ADDVCQEVMLKVLYGLKNFEGKSKFKTWLYSITYNECITQYRKERRKRRLMDALSLDPLE
EASEEKTPKPEEKGGLDRWLVYVNPIDREILVLRFVAELEFQEIADIMHMGLSATKMRYK
RALDKLREKFAGIAET
NT seq 591 nt   +upstreamnt  +downstreamnt
ttgaataaagctcaatcgctctccatgcgctacgacccccgcgagctctctgatgaggag
ttggtcgcgcgctcgcataccgagctgtttcacgtaacacgcgcctacgaagaactgatg
cggcgttaccagcgaacattatttaatgtgtgcgcaagatatctcgggaacgatcgcgat
gcagacgatgtctgtcaggaggtcatgttgaaggtgctgtatggcctgaagaacttcgag
ggtaaatcgaagttcaagacatggctatatagcatcacgtacaacgagtgcatcacacag
tatcgcaaggaacggcgaaagcgtcgcttgatggacgcattgagtcttgaccccctcgag
gaagcgtccgaagaaaagacgccgaaacctgaggaaaaaggcggacttgatcgctggttg
gtgtatgtgaacccgattgatcgtgaaattctggtgctacgatttgtcgcagaactggag
tttcaggaaatcgcagacatcatgcatatgggtttgagcgcaacaaaaatgcggtacaaa
cgcgctctagataaattgcgtgagaaatttgcaggcattgctgaaacttag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (11)   

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