KEGG   Pseudomonas parafulva: NJ69_20145
Entry
NJ69_20145        CDS       T03520                                 
Name
(GenBank) peptidase
  KO
K05366  penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
Organism
ppv  Pseudomonas parafulva
Pathway
ppv00550  Peptidoglycan biosynthesis
ppv01100  Metabolic pathways
ppv01501  beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:ppv00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    NJ69_20145
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01501 beta-Lactam resistance
    NJ69_20145
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01003 Glycosyltransferases [BR:ppv01003]
    NJ69_20145
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:ppv01011]
    NJ69_20145
Enzymes [BR:ppv01000]
 2. Transferases
  2.4  Glycosyltransferases
   2.4.99  Transferring other glycosyl groups
    2.4.99.28  peptidoglycan glycosyltransferase
     NJ69_20145
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.16  Serine-type carboxypeptidases
    3.4.16.4  serine-type D-Ala-D-Ala carboxypeptidase
     NJ69_20145
Glycosyltransferases [BR:ppv01003]
 Polysaccharide
  Bacterial polysaccharide (excluding LPS)
   NJ69_20145
Peptidoglycan biosynthesis and degradation proteins [BR:ppv01011]
 Peptidoglycan biosynthesis and degradation
  Glycosyltransferase/DD-Transpeptidase (Class A PBP)
   NJ69_20145
SSDB
Motif
Pfam: Transgly Transpeptidase PCB_OB CyanoTRADDas_TM
Other DBs
NCBI-ProteinID: AIZ35149
UniProt: A0A0A7JW82
Position
complement(4599823..4602276)
AA seq 817 aa
MIRLLKFFWWSFVAVICALVLGLSGAFLYLSPSLPSVDSLRSIQLQIPLRVYSSDGKLIA
EFGEMRRSPIRFAEIPPQFIQALLSAEDDNFLNHYGVDPSSLMRAATQLVKSGHIQTGGS
TITMQVAKNFFLTSERSFSRKTNEILLALQIERELTKDEILELYVNKIYLGNRAYGIDAA
AQVYYGKSIRDVSLAQMAMIAGLPKAPSRFNPLANPVRAKERRDWILGRMYKLGKIDQAS
YQAALAEPLNASYHVPAPEVNAPFVAEMARAEMVGRYGSEAYTEGYRVTTTVPSDTQEIA
NKAVLNGLTAYDERHGYRGPEARYPGKTRNAWQQDLTKQRTLGGLEPAIVTQVDKTGLKV
LTRAGQEEDVAWDTMKWARPFINSNAQGRSPQSPADVAQVGDLIRVQRLDDGTLKFSQVP
GAQSALVTLNPTDGAIQALVGGFSFEQSNYNRAMQAKRQPGSSFKPFVYSAALDNGYTAA
SLVNDAPIVFVDESIDKVWRPKNDTNTFLGPIRMREALYKSRNLVSIRLLQAMGVDRTID
YIAKFGFNKQDLPRNLSLALGTATLTPMEIATGWSTFANGGYKINPYLIERIESRSGETL
FTANPARVPQGQQDQAGIAAPEAPITTLAQPGTAPSALGQIAPPPLTPVVAERIIDGRTT
YILTSMLQDVIKRGTGRRALALGRSDLAGKTGTTNESKDAWFSGYNADYMTTVWVGFDQP
ETLGRREYGGTVALPIWMDFMGPALKGKPEHPPAEPEGILSLRVDPVSGRAATPSTPNAY
FELFKAEDSPPSGDELGNGVAPGSPLPADESAPMDLF
NT seq 2454 nt   +upstreamnt  +downstreamnt
ttgattcgcctgctgaagttcttctggtggtctttcgtcgccgtcatctgcgcgctcgta
ctcggtctgagcggggcgtttctgtatcttagtcccagcctgccgtcggtcgactcgctc
agaagcatccagttgcagataccgctgagggtgtacagcagcgacggcaagctgattgcc
gagtttggcgagatgcggcgctctcccattagattcgcggaaattcccccgcagttcatc
caggcacttctgtcagccgaagacgacaatttcctcaaccattacggcgtcgatccaagc
agcctgatgcgcgctgcgacccaattggtgaaatccggtcatattcagactggcggcagc
accatcaccatgcaggtggccaagaatttcttcctcaccagtgaacgcagcttctcgcgc
aagaccaacgaaatcctcctggccctgcagatcgaacgcgagctgaccaaggacgaaatc
ctcgagctgtacgtgaacaagatctacctgggcaatcgtgcctatggcatcgatgcggca
gcgcaggtgtattacggcaagtcgatccgtgacgtcagcctggcgcaaatggcgatgatc
gccggcctgcccaaggcgccgtcgcgtttcaacccgctggccaacccggtacgcgccaaa
gagcgccgcgactggatcctggggcgcatgtacaagctcggcaagatcgaccaggcgagc
tatcaggccgcgctcgccgagccgctgaacgccagctatcacgtgccggcgccggaggtg
aatgcgccgttcgtcgccgaaatggcgcgggccgaaatggttggccgatacggcagcgag
gcctacaccgaaggctatcgcgtcaccaccacggtccccagcgatacccaggagatcgcc
aacaaggcggtgctcaatggcctgaccgcttacgacgagcgccacggctaccgtggcccc
gaagcgcgctatccgggcaagacgcgcaacgcctggcagcaggacctgaccaaacagcgc
accctcggcgggctggaaccggccatcgtcacccaggtcgacaagactggcctgaaggta
ctgacccgtgccggacaggaagaagacgtggcctgggacaccatgaagtgggcccggccg
ttcatcaacagcaacgcccagggccgctcgccgcagtcgccggcagacgtggcgcaggtc
ggcgacctgatccgtgtgcagcgcctggacgacggcacgctcaagttcagccaggtgccg
ggggcgcagagtgcgctggtgacactgaacccgaccgacggcgcgatccaagcgctggtc
ggcggcttctcgttcgagcagagcaactacaaccgcgccatgcaagccaagcgccagccg
ggttcgagcttcaagccgttcgtctacagcgctgcgctggacaacggctacaccgccgcc
agcctggtgaacgacgcaccgatcgtgttcgtcgacgagtccatcgacaaagtctggcgt
ccgaagaacgacaccaacaccttcctcggcccgatccgcatgcgcgaggcgctgtacaag
tcgcgcaacctggtgtcgatccgcctgctgcaagccatgggcgtcgatcgcaccatcgac
tacatcgccaagttcggtttcaacaagcaggacctgccgcgcaacctgtcgctggccttg
ggcaccgcaacgctcacgccgatggagatcgccaccggctggagcaccttcgccaacggc
ggctacaagatcaacccgtacctgatcgagcgtatcgagagccgtagcggcgagaccctg
ttcaccgccaatccggcgcgggtaccgcaaggccagcaggatcaggccggcatcgctgca
ccggaagcgccgatcactactctcgcgcagccgggtaccgcgccgtcggcgctgggccag
atcgccccgccgccactgacgccggtggtggccgagcggatcatcgacggtcgtaccacc
tatatcctcaccagcatgctgcaggacgtgatcaagcgcggcactggccgacgcgccttg
gccctgggccgcagcgacctggcgggcaagaccggtaccaccaacgaatccaaggatgcc
tggttctccggttacaacgccgactacatgaccaccgtctgggtcggcttcgatcagccg
gagaccttgggtcgtcgcgagtatgggggcaccgtcgcgctgccgatctggatggacttc
atgggcccggcgctcaagggcaagcccgagcatccgccagccgagcccgagggcattctc
agcctgagggtcgatccggtgagcggccgtgcggcgacgccaagcacgccgaatgcctac
ttcgagctgttcaaggctgaagactcgccaccttcaggtgacgaactgggcaatggcgta
gcaccgggcagcccgctcccggccgatgaatcggcgccgatggacctgttctaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (18)   

Download RDF
DBGET integrated database retrieval system