KEGG   Pseudomonas parafulva: NJ69_21130
Entry
NJ69_21130        CDS       T03520                                 
Name
(GenBank) RNA helicase
  KO
K05591  ATP-dependent RNA helicase DbpA [EC:5.6.2.6]
Organism
ppv  Pseudomonas parafulva
Brite
KEGG Orthology (KO) [BR:ppv00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ppv03009]
    NJ69_21130
Enzymes [BR:ppv01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     NJ69_21130
Ribosome biogenesis [BR:ppv03009]
 Prokaryotic type
  rRNA helicases
   NJ69_21130
SSDB
Motif
Pfam: DEAD Helicase_C DbpA ResIII P-loop_SecA CMS1 SBP_bac_3
Other DBs
NCBI-ProteinID: AIZ35321
UniProt: A0A0A7JSH7
Position
complement(4848075..4849460)
AA seq 461 aa
MTTDSTAFASLPLSAAMLANLDALGYAAMTPIQAQSLPVILKGQDLIAQAKTGSGKTAAF
GIGLLNPINPRYFGCQALVLCPTRELADQVAKELRRLARAEDNIKILTLCGGVSLGPQIA
SLEHGAHIIVGTPGRIQQHLDKGTLDLKGLNTLVLDEADRMLDMGFFDAIAAIIGKTPSR
RQTLLFSATYPAGIEQLAADFMRTPQQVKVESQHSDSQIEQRFIEIDPQQRLEAVTRVLG
HYRPQSCVAFCFTKQQCEDLVIHLTAKGIVAQALHGDLEQRDRDQVLTMFANRSSSVLVA
TDVAARGLDIDGLDLVINVELARDAEIHVHRVGRTGRAGEKGMAISLVAPAEGHRAQAIE
DLQKRPLRWEPLDGLKHKGGEPLLPPMTTLCIGAGRKDKLRPGDILGALTGDAGLPGKQV
GKIAIFDFVAFVAVERAVAKRAMQRLNSGKIKGRALKVRII
NT seq 1386 nt   +upstreamnt  +downstreamnt
gtgaccaccgactccaccgctttcgcttccctgccgctgtccgccgccatgctggccaac
ctggatgccctgggttatgccgcgatgaccccgatccaggcgcagagcctgccggtcatc
ctcaagggccaggacctgatcgcccaggccaagaccggcagcggcaagaccgccgccttc
ggcatcggcctgctcaacccgatcaacccgcgctacttcggctgccaggcgctggtgctg
tgccccacccgcgagctcgccgaccaggtggccaaggaactgcgccgcctggccagggcc
gaggacaacatcaagatcctcaccctgtgcggcggcgtctcgctcggcccgcagatcgcc
tcgctggaacacggcgcgcacatcatcgtcggcaccccagggcgcatccagcagcacctg
gacaagggcaccctcgacctcaagggcctcaacacgctggtgctggacgaagccgaccgc
atgctcgacatgggcttcttcgacgccatcgccgcgatcatcggcaagaccccctcgcgg
cgccagaccctgctgttctcggccacctacccggccggcatcgagcaactggccgccgac
ttcatgcgcacgccgcagcaggtcaaggtcgagagccagcacagcgacagccagatcgag
cagcgcttcatcgagatcgatccacagcagcgcctggaggcggtcacccgcgtgctcggt
cactaccgtccgcagtcgtgcgtggcgttctgcttcaccaagcagcagtgcgaagacctg
gttatccacctgaccgccaagggcatcgtcgcccaggccctgcacggcgacctggaacag
cgcgaccgcgatcaggtgctgacgatgttcgccaaccgcagcagctcggtgctggtggcc
accgatgtggccgctcgcggcctggacatcgatggcctggacctggtgatcaacgtcgaa
ctggcgcgcgacgccgagattcacgtgcaccgcgtcggacgtaccggccgcgccggtgag
aaagggatggcgatcagcctggtggcgccggccgaaggccatcgcgcccaggccatcgag
gacttgcagaagcgcccgttgcgctgggaaccgctggacggcctcaagcacaagggtggc
gagcccctgctgccgccgatgaccaccctgtgcatcggtgccgggcgcaaggacaagctg
cgcccaggcgacatcctcggtgcgctgaccggcgacgccgggctgccgggcaagcaagtg
ggcaagatcgccatcttcgacttcgtcgccttcgtggcggtggagcgggcggtggccaag
cgggcgatgcagcggctcaacagcggcaagatcaagggccgcgcgctcaaggtccgcatc
atctaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (15)   

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