KEGG   Pseudomonas putida W619: PputW619_2505
Entry
PputW619_2505     CDS       T00675                                 
Name
(GenBank) type VI secretion ATPase, ClpV1 family
  KO
K11907  type VI secretion system protein VasG
Organism
ppw  Pseudomonas putida W619
Pathway
ppw02025  Biofilm formation - Pseudomonas aeruginosa
ppw03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:ppw00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    PputW619_2505
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02025 Biofilm formation - Pseudomonas aeruginosa
    PputW619_2505
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:ppw02044]
    PputW619_2505
Secretion system [BR:ppw02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   PputW619_2505
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 AAA AAA_5 ClpB_D2-small AAA_22 AAA_16 AAA_25 Clp_N TniB nSTAND3 ATPase_2 Sigma54_activat NACHT AAA_7 AAA_14 Zeta_toxin IstB_IS21 AAA_24 SLFN-g3_helicase Hpr_kinase_C T4SS
Other DBs
NCBI-ProteinID: ACA73005
UniProt: B1J8F4
Position
complement(2784125..2786722)
AA seq 865 aa
MNLKSLFAKLNETSRTATESAAALCLSEHHYDVEVEHLLLQLLDNSDSDLPLILRHYDVV
AERLQAQLVTALGTFKKGNTRTPALSPHITRMIEQAWVLASIEYGVGQVRSAHLLQALLD
DAELRRVVIASAPELEKINADDLRLNLSALVEGSAESRLASPLASPSAPVAGAGKVGGKT
PALDQYTVNLTQSARDGRIDPVLGREFEVRQMVDILTRRRQNNPILTGEAGVGKTAVVEG
LALRIAQGDVPAPLKDVAVHTLDLGLLQAGAGVKGEFENRLKAVIEEVKRSLHPIILFID
EAHTLIGSGGQAGQNDAANLLKPALARGELRTIAATTWAEYKKYFEKDAALARRFQVVKV
EEPDEDKAIHMLRGLLGKMREHHKVAVMDEALVQAVRLSNRYITGRQLPDKAVSVLDTAC
ARIALAQSSQPGALEDCRRHIDNLQAEIAVLDHEAGKGHDHARRLAELQAALQAEQSHEQ
RLSAQWQQELGLVEQLKALDSAKDTDAAQLNALRAELSAVQGDQPLVHALVDAGAIAQVI
SGWTGIPLGKMLRDEIDTVQRLPALLGERVLGQDHALHEIGKRIKISRARMEDPNKPIGV
FLLLGPSGVGKTETALALADTLYGGERNLITINMSEYQEAHTVSSLKGSPPGYVGYGEGG
VLTEAVRRKPYSVVLLDEVEKAHPDVLELFFQVFDKGVLDDGEGREINFRNTVIILTSNT
GTERIMQTCLNAQTLPTPEAIVEGLRDELNHVFKPAFLGRLSIVPFYPVQDQILERIVAL
KLERIAKRFARNHQAELSYDDALVKAIAARCTEVDSGARNIDNILSRTLMPELAQHVLER
MAQDAPIERLTIELGSDGDFAYRLA
NT seq 2598 nt   +upstreamnt  +downstreamnt
gtgaacctgaagtctctgttcgccaagcttaacgaaaccagccgcacggccactgaaagc
gcggcggccctgtgcctgtcggagcaccactacgacgtcgaggtggaacacctgctgctg
cagttgctggacaacagcgacagtgacctgccgctgatcctgcgccactacgacgtggtc
gccgagcgcctgcaggcgcaactggtgaccgccctgggtaccttcaagaagggcaacacc
cgcaccccggcgctgtccccgcacatcacccgcatgatcgagcaggcatgggtactggcc
tcgatcgagtatggtgtgggccaggtgcgcagtgcgcacctgttgcaagcattgctcgac
gacgccgaactgcgccgggtggtcatcgcctccgcaccggagcttgagaagatcaacgcc
gacgacctgcgcctgaacctcagcgcactggtcgaaggcagtgccgaatcccggctcgcc
agccctctggccagcccctcggcgccagtggcaggcgccggcaaggttggcggcaagacc
ccggccctggaccagtacaccgtcaacctcacacaaagcgcccgtgacggccggatcgac
ccggtgcttggccgcgagttcgaagtgcggcagatggtcgacatcctcacccgtcgccgc
cagaacaacccgatcctcaccggcgaagccggcgtcggcaagaccgcagtggtcgaaggc
ctggccttgcgcatcgcccagggcgatgtgccagccccactcaaggacgtcgccgtgcac
accctcgacctgggcctgctgcaggcgggtgccggggtcaagggcgagttcgaaaaccgc
ctcaaagcggtgatcgaagaggtcaagcgcagcctgcacccgatcatcctgttcatcgac
gaagcccacaccctgatcggctccggtggccaggccgggcagaacgatgccgcgaacctg
ctcaagccagccctggcccgtggcgagctgcgcaccatcgctgccaccacctgggccgaa
tacaagaagtacttcgaaaaagacgccgccctcgcccgtcgcttccaggtagtcaaggtc
gaagagcctgacgaagacaaggccatccacatgctgcgcggcctgctcggcaagatgcgc
gagcaccacaaggtggcggtgatggacgaagcactggtacaggccgtgcgcctgtccaac
cgctacatcaccggccgccagctgcccgacaaggcggtcagcgtgctcgataccgcctgc
gcacgcatcgccttggcgcagtcgtcgcaacccggcgcgctggaagactgccgccgccat
atcgacaacctgcaggccgaaatcgccgtgctcgaccacgaagccggcaagggccacgac
catgcccggcgccttgccgagctgcaggccgccctgcaggccgagcagtcgcacgaacag
cgcctgagcgcccagtggcagcaggagctgggcctggtcgagcaactcaaagccctggac
agcgccaaggacaccgacgccgcccagctcaacgccctgcgcgccgagctgagcgccgtc
cagggcgaccagcccctggtccacgccttggtcgatgccggcgccatcgcccaggtgatc
agcggctggaccggtatcccgctgggcaagatgctgcgtgacgagatcgacaccgtgcag
cgcctgcctgcgctgctcggtgaacgcgtgctgggccaggaccacgcgctgcacgaaatc
ggcaagcgcatcaagatttcccgcgcccgcatggaagacccaaacaaaccgatcggcgtg
ttcctgctgctgggccccagcggcgtcggcaagaccgaaaccgcgctggcattggccgac
accctgtacggcggtgagcgcaacctgatcaccatcaacatgtccgagtaccaggaggcc
cacaccgtatcgagcctcaaaggctcgccacccggctacgtcggttacggcgaaggcggc
gtgctgaccgaggccgtgcgccgcaagccctacagcgtggtgctgctcgacgaggtggag
aaggcccaccccgacgtgctcgagctgttcttccaggtgttcgacaaaggcgtgctggac
gacggcgaaggccgcgagatcaacttccgcaacacggtgatcatcctcacgtccaacacc
ggcaccgagcgcatcatgcagacctgcctgaatgcccagacgctgcctacccccgaggcc
atcgtcgaaggcctgcgcgacgagctgaaccacgtcttcaaaccggccttcctcggccgc
ctgagcatcgtgccgttctacccggtgcaggaccagatcctcgagcgcatcgttgccctc
aagctcgagcgtatcgccaaacgtttcgcccgcaaccaccaggctgagctgagctacgac
gacgccctggtcaaggccatcgcggcacgttgcaccgaggtcgacagcggcgcacgcaac
atcgacaacatcctgtcccgcaccctgatgcccgagcttgcccagcacgttctcgagcgc
atggcccaggacgcgccgatcgagcgcttgacgatcgagctgggcagcgatggcgatttc
gcctatcgcctggcctga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (22)   
   Pfam (22)   
All databases (31)   

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