KEGG   Pseudomonas putida DOT-T1E: T1E_0801
Entry
T1E_0801          CDS       T02181                                 
Symbol
rluD
Name
(GenBank) RluA family pseudouridine synthase
  KO
K06180  23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
Organism
ppx  Pseudomonas putida DOT-T1E
Brite
KEGG Orthology (KO) [BR:ppx00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ppx03009]
    T1E_0801 (rluD)
Enzymes [BR:ppx01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.23  23S rRNA pseudouridine1911/1915/1917 synthase
     T1E_0801 (rluD)
Ribosome biogenesis [BR:ppx03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    T1E_0801 (rluD)
SSDB
Motif
Pfam: PseudoU_synth_2 S4 TruB_N
Other DBs
NCBI-ProteinID: AFO46659
UniProt: I7C4R9
Position
complement(909269..910327)
AA seq 352 aa
MMSAPANPGTKEAVFNHKLAAETKGCAPAESSMSEIIQLSAEVPSELGGQRLDQVAAQLF
AEYSRSRLTSWIKEGRLTVDGAVVRPRDLVHGGSLLALEAEQEAQGEWIAEDIELDIVYE
DDHILVINKPAGLVVHPAAGHASGTLLNALLHHVPDIVNVPRAGIVHRLDKDTTGLMVVA
KTLQAQTKLVEQMQARKVSRIYECIVIGVVTAGGKIDAPIGRHGGMRQRMAVTDGGKPAV
SHYRVLKRFRSHTHVRVKLETGRTHQIRVHMAHVGFPLVGDQTYGGRFRIPPAASPTMVE
AVKTFPRQALHARFLALAHPITGEVMKWESPLPDDFVWLLSLLNQDRESFIG
NT seq 1059 nt   +upstreamnt  +downstreamnt
atgatgagcgccccggccaaccccgggacaaaagaagccgtatttaaccacaagctcgca
gccgaaaccaaaggctgtgcgcccgccgaatcgagcatgtccgagatcattcaacttagc
gcagaggtaccgtccgaactgggcggccaacgcctcgaccaggtcgccgcccaattgttc
gccgagtactcgcgttcgcggctaacttcgtggatcaaagagggccgcctgacggtcgat
ggtgcagtcgtgcgccctcgagaccttgttcatggtggctctctgcttgccctggaggcc
gaacaagaggcccagggcgagtggatcgcagaagatatcgaactggatatcgtctacgaa
gacgaccacatcctggtgatcaacaagcctgccgggctggttgtgcacccggcggccggg
catgccagcggtaccctgctcaacgcgctgctgcaccatgtgccagacatcgtcaacgtg
ccgcgcgccggtatcgtgcaccgcctggacaaggacaccaccggcctgatggtggtggcc
aagaccctgcaggcgcagaccaagctggtcgagcagatgcaggcccgcaaggtcagccgc
atctacgagtgcatcgtgattggcgtggtgactgccggtggcaagatcgacgcgcctatc
ggccgtcacggcggcatgcgccagcgcatggctgtaaccgacggcggcaagccggcggtc
agccactaccgcgtactcaagcgcttccgctcgcacacccatgtgcgggtcaagctggaa
accggccgtacccaccagattcgcgtgcacatggcccacgtgggtttcccgctggttggc
gaccagacgtacggcgggcgcttccgtattccgcccgctgccagcccgaccatggtcgag
gcggtcaagaccttcccgcgccaggcgctgcatgcgcgtttccttgccttggcccacccg
attaccggtgaagtcatgaagtgggaatcgccactgccggatgacttcgtctggttgctg
tcgctgctgaaccaggaccgcgagagcttcatcggatga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

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