KEGG   Paenibacillus polymyxa E681: PPE_05965
Entry
PPE_05965         CDS       T01319                                 
Name
(GenBank) transcriptional regulator
  KO
K03530  DNA-binding protein HU-beta
Organism
ppy  Paenibacillus polymyxa E681
Brite
KEGG Orthology (KO) [BR:ppy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ppy03032]
    PPE_05965
   03036 Chromosome and associated proteins [BR:ppy03036]
    PPE_05965
   03400 DNA repair and recombination proteins [BR:ppy03400]
    PPE_05965
DNA replication proteins [BR:ppy03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    PPE_05965
Chromosome and associated proteins [BR:ppy03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    PPE_05965
DNA repair and recombination proteins [BR:ppy03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      PPE_05965
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_euk_2 HU-CCDC81_bac_2 HU-CCDC81_euk_1 HU-DNA_bdg DUF2267 DUF937
Other DBs
NCBI-ProteinID: AJW69260
UniProt: A0A2I4JK60
Position
complement(3016732..3017112)
AA seq 126 aa
MEGSTPPGLFYTGDLISVINTDNLNAGLHLNWEVNIMNKTDLINQVSESTELSKKDVTKA
IDAVFEAISGALQSGDKVQLVGFGNFEVRERSARKGRNPQTGEEIEIPASKIPAFKPGKA
LKDGIK
NT seq 381 nt   +upstreamnt  +downstreamnt
atggaaggcagtacgccgcccgggttattttatacaggcgacctcatatcggtcattaac
accgataaccttaatgctggactacacttgaattgggaggtgaatattatgaataaaacg
gatttgatcaatcaggtttctgaaagcactgaattgtccaaaaaggacgtaaccaaagca
atcgatgcagtatttgaggcgatctctggagcgctgcaaagcggagataaggtgcaactg
gtaggtttcgggaactttgaggttcgtgaacgttccgcacgtaaaggacgtaacccgcaa
acaggagaagaaatcgaaatccctgcgagtaaaattccggcatttaaaccgggtaaagcg
ctcaaagacggaattaaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (17)   

Download RDF
DBGET integrated database retrieval system