KEGG T02456: H045

Pseudomonas poae: H045_00575

Entry

H045_00575        CDS       T02456

Name

(GenBank) deoxyribodipyrimidine photolyase

K01669

deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]

Organism

ppz Pseudomonas poae

Brite

KEGG Orthology (KO) [BR:ppz00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ppz03400]
    H045_00575
Enzymes [BR:ppz01000]
4. Lyases
  4.1  Carbon-carbon lyases
   4.1.99  Other carbon-carbon lyases
    4.1.99.3  deoxyribodipyrimidine photo-lyase
     H045_00575
DNA repair and recombination proteins [BR:ppz03400]
Eukaryotic type
  SSBR (single strand breaks repair)
   Direct repair
    H045_00575
Prokaryotic type
    H045_00575

SSDB

Motif

Pfam:

FAD_binding_7 DNA_photolyase Fer2_4

Other DBs

NCBI-ProteinID:

AGE24191

Position

complement(124787..126229)

AA seq 480 aa
MHLIWLRTDLRLHDNTALAAASQRGPMAAVYLITPEQWLAHDDAACKVDFWLRNLQHLRQ
ALGTLNIPLLIRTAPTWDQAPAVLSKLCQELAVASVHVNEEYGIHESRRDQAVAQALEAC
GVTFHSYLDQLFFQPGSVLTKTGTYFQVFSQFRKVCYSRLHSALPRLVATPKAQQKLPLD
SDPIPSSVPGFEAPSDSLRALWPAGEDEARRRLDTFADQQIGYYKDERDYPAKPGTSQLS
AYLAAGVVSPRQCLHAALQSNSGEFETGNVGAVTWINELLWREFYKHILVGYPRVSRHRA
FRPETEAVAWRHAPKDLAAWQEARTGLPIIDAAMRQLLETGWMHNRLRMVVAMFLTKNLL
IDWREGERFFMRHLIDGDLAANNGGWQWSSSTGTDSAPYFRIFSPLSQSEKFDGEGVFIK
HWLPQLAALNKKEVHNPEAAGGLFGVADYPRSIVDLKKSRERALAAFRSLPSRQAVAEHE

NT seq 1443 nt +upstreamnt +downstreamnt
atgcatttgatctggctgcgcaccgacctgcgcctgcacgacaacaccgccctggccgcc
gcgagccagcgcggcccgatggccgccgtgtacctgatcacgcccgagcaatggctcgcc
cacgacgatgccgcgtgcaaggtcgacttttggctgcgcaacctgcagcacctgcgccag
gcgctgggcacgctcaatattcctttgctgatccgcacggcgccgacctgggaccaggct
cccgccgtgctgagtaagctgtgccaggaattggcggtggcctcggtgcacgtcaacgag
gaatacggcatccatgagagccgccgcgaccaggccgtggcccaggcgctggaagcctgc
ggggtgacgttccacagctacctcgaccaactgtttttccaacccggcagcgtgctgacc
aagaccggtacctacttccaggtcttcagccagtttcgcaaggtgtgctacagccgcctg
cacagcgccctgccgcgcctggtggcaacgccaaaagcccagcaaaagctgccgctcgac
agcgacccgattccgtccagcgtgcccggtttcgaagcgcccagcgacagcctgcgcgct
ctctggccggccggcgaagacgaagcccgacgccgcctcgacaccttcgccgaccaacag
atcggctattacaaggacgagcgcgactacccggccaaaccgggcaccagccagctctct
gcctaccttgccgccggcgtggtttcgccgcgccagtgcctgcacgcggcgttgcagagc
aacagtggcgagttcgagacgggcaacgttggcgccgtcacctggatcaacgaattgctg
tggcgcgagttctacaagcacatcctggtcggctatccacgggtgtcgcgccaccgcgcg
ttccggcccgagaccgaagccgtcgcctggcgccacgcccccaaggacctggcggcctgg
caggaagcgcgcaccggcctgccgatcatcgacgcggcgatgcgccagttgctggagacc
ggctggatgcacaaccgcctgcgcatggtggtggcgatgttcctgaccaagaacctgctg
atcgactggcgcgagggcgagcgttttttcatgcgccacctgatcgacggcgacctcgcc
gccaacaacggcggctggcagtggagttcctccaccggtactgattcggcgccgtatttc
cgcattttcagcccattgagccagtcggaaaaattcgacggcgagggtgtgttcatcaag
cactggctgccgcaactggcggcgcttaataaaaaggaagtgcacaaccccgaggccgca
ggcggactgttcggcgtggcggattacccgcgctcgatcgtcgacctgaaaaaatcccgt
gagcgcgccctcgccgccttccgcagcctgccgtcccgtcaagcggtggccgagcatgag
tga

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (11)   

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