KEGG   Pseudomonas poae: H045_17315
Entry
H045_17315        CDS       T02456                                 
Name
(GenBank) exonuclease family protein
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
ppz  Pseudomonas poae
Pathway
ppz03030  DNA replication
ppz03430  Mismatch repair
ppz03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ppz00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    H045_17315
   03430 Mismatch repair
    H045_17315
   03440 Homologous recombination
    H045_17315
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ppz03032]
    H045_17315
   03400 DNA repair and recombination proteins [BR:ppz03400]
    H045_17315
Enzymes [BR:ppz01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     H045_17315
DNA replication proteins [BR:ppz03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     H045_17315
DNA repair and recombination proteins [BR:ppz03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     H045_17315
SSDB
Motif
Pfam: RNase_T Rv2179c-like RNase_H_2 Ribosomal_L26
Other DBs
NCBI-ProteinID: AGE27525
Position
complement(3972135..3972746)
AA seq 203 aa
MERIAVIDFETTGITPSSHCRATEIGVVILERGQIVDRYQSLMNAGVRVPGFIEQLTGIS
NAMLRSAPPAERVMNEVNEFVGTTPLLAHNAAFDQKFWDFELGLIRRTRLQKFACSLLLA
RRLLPAAPNHKLGTLNSYAQLPHTGKAHRALADAEMAANLTAHLAQELRRTHGLRELSHD
LLCTLQKVPAAKINEHLKKHRGF
NT seq 612 nt   +upstreamnt  +downstreamnt
ttggaacgtatagcggtcatcgactttgaaaccaccggcatcacgccgagcagccattgc
cgcgcgacggaaatcggcgtggtcattcttgaacgtgggcaaatcgtcgaccgttatcag
agcctgatgaacgccggcgtgcgcgtgcccggctttatcgaacaactcaccggcatcagc
aatgccatgctgcgcagcgcaccgccggccgagcgcgtgatgaatgaagtcaacgaattc
gtcggcaccacgccgctgctggcccacaacgccgcgttcgaccagaagttctgggacttc
gagctgggcttgatacgccgcacccgcctgcaaaaattcgcctgctccctgctgctggcc
cggcgcctgctgccggctgcaccgaaccacaaactcggcaccctcaacagctacgcgcaa
ctgccccacaccggcaaggctcaccgggcgctggcggatgcggagatggcggcgaacctc
acggcgcatctggcccaggagttaaggcgcacccacggcttgcgcgaactgtcccatgat
ttgctgtgcaccttgcagaaagtgccggcggcgaagatcaatgagcacctgaagaaacat
cgcgggttttga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (16)   

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