KEGG   Cutibacterium avidum: PALO_05220
Entry
PALO_05220        CDS       T02632                                 
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
  KO
K02337  DNA polymerase III subunit alpha [EC:2.7.7.7]
Organism
pra  Cutibacterium avidum
Pathway
pra03030  DNA replication
pra03430  Mismatch repair
pra03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pra00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    PALO_05220 (dnaE)
   03430 Mismatch repair
    PALO_05220 (dnaE)
   03440 Homologous recombination
    PALO_05220 (dnaE)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pra03032]
    PALO_05220 (dnaE)
   03400 DNA repair and recombination proteins [BR:pra03400]
    PALO_05220 (dnaE)
Enzymes [BR:pra01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     PALO_05220 (dnaE)
DNA replication proteins [BR:pra03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     PALO_05220 (dnaE)
DNA repair and recombination proteins [BR:pra03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     PALO_05220 (dnaE)
SSDB
Motif
Pfam: DNA_pol3_alpha DNA_pol3_finger PHP HHH_6 tRNA_anti-codon
Other DBs
NCBI-ProteinID: AGJ77654
Position
complement(1150193..1153765)
AA seq 1190 aa
MARSDFVHLHTHTEYSMLDGAASNEKLFAEVARQGMPAVAMTDHGNMFGAYEFFQISKKY
DGDQNPLVKPIIGIEAYVAPSTRMSRVQEFWGISRDAGDPDAEGGKDVSGGGRYTHMTMW
AKDPEGLHNLFRLSSLASYEGYYMKPRMDRELMSKYPGGIIASTGCPSGEVQTRLRLGQF
EEACLAAAAYQDIFGKENYFCELMDHGVPIEKQVRSDLLKLAKRLDIPLLVTNDSHYVTE
DQADAHDSLLCVGVGRNKDDPNRFRFNGSGYYIKSSDEMRALFPDHPEACDNTLLLTEMI
GSYDEVFKHVDRMPQFDVPEGETQESWLRKKLQEGMDEKFGPNPPKEVLDRLETELSVIE
PLGFSSYFLVVSDICNAARSMGVPVGPGRGSAAGSLVAYLTGIIAINPLEHGLLFERFLN
PERVNPPDIDLDFDDRQRDKVIDYVTHKYGAEYTSQVNTFGKIKAKAAVKDANRILGYPF
ALGDKITKAMPPDVMGKGVPLGKIFDPSHERYGEGQEFRQLVSDNADVAKVVETAKGLEG
LIRGTGVHACAFILSSAPLLDLVPMHKRDKDGMIIAGFAYPQLEEMGLMKMDFLGLRNLG
IMDHCIKIIKENRGIDVDLKELALDDENTYEMLARGDTLGVFQLDGTAMRSLLRLMGPTC
FDDIVAVLALYRPGPMGANAHISYAQRKNNREPIIPIHPELKEDLDEILAPTYHLIVYQE
QIMSIARKLAGYTLGGADLLRRAMGKKKKHILEENFIPFQAGMREHGYSDDAIQTLWDVM
VPFAGYAFNKSHAAGYGLVSYWTAYLKANYPAEYGAALLTSVGDDKDKMAMYLADMRSQH
INVLPPDVNASSLEFTAVGEDIRFGLGAVRNVGANAVAEIIRAREENGPATDFFSFLDQV
SLTVCNKRLIESLIKAGAFDSMGHSRRGLMAVYEQAVDAVIDIKRHQANGQDDLFGMGDD
SEPTQLGVERVVPEDDWDRSTKLAFEREMLGLYVSDHPLRGLEAALEAESDISVAELVNP
EGHHEGRYTIAGMVTQIVRRTTKNGDIWASITLEDLGASITIACFPKVYQRVEPLLAVDS
ILKVRGFIRERDETVEMSANDVWLLDLTDAGNAPMTIDLRRGRCNRGTIEGLRGVLRNHP
GSSEVRLRLLDGKVTTTFRLADELKVTTGQPLMADLKALLGPSCIPRRQS
NT seq 3573 nt   +upstreamnt  +downstreamnt
gtggcccgatccgacttcgtccaccttcatactcacactgagtactcgatgctggatggt
gctgccagcaacgagaagctttttgccgaggtggctcgtcagggcatgccggcggtcgcc
atgaccgaccacggcaacatgttcggtgcctatgagttcttccagatctccaagaagtac
gacggagaccagaatccgctggtcaagccgatcatcggcatcgaggcctatgtcgctccg
agtacgcgcatgtcccgggtacaggaattctggggaatctcccgtgacgcaggcgatccg
gatgccgagggtggcaaggacgtctccgggggtgggcgctacacccacatgacgatgtgg
gccaaggacccggaggggcttcacaacctgttccggttgtcctccctggcctcctatgag
ggctactacatgaagccccgcatggatcgcgaactgatgtccaagtatcccggtggcatc
attgcctccaccggatgcccgtcgggtgaggtgcagacccgactgcgcctgggccagttc
gaggaagcctgcctggccgcggctgcctaccaggacatcttcggcaaggagaactacttc
tgcgagttgatggaccatggtgtcccgatcgagaagcaggtgcgttccgacctgctgaag
ctggccaagaggctggacattccgcttctggtcaccaatgactcgcactacgtcaccgag
gaccaggctgacgcccacgactccctgctctgcgtgggcgtgggtcgtaacaaggatgat
ccgaaccgcttccgtttcaacggctcgggctactacatcaaatcttctgacgagatgcgg
gcgctgttccccgaccatcccgaggcctgcgacaacaccctgctgttgaccgagatgatc
gggtcttacgatgaggtcttcaagcacgtcgaccggatgccgcagttcgacgtcccggag
ggggagactcaggagtcctggttacgcaagaagcttcaggagggcatggatgagaagttc
ggtccgaatccgcccaaggaggtcctcgaccgtctcgagacggagctctcggtcatcgag
ccgctgggattctcttcctacttcctcgtcgtctccgacatatgcaatgcggcgcgctcc
atgggcgtgccggtcgggccgggtcgtggatcggctgccggttccctcgtcgcctatctg
acgggcatcatcgccatcaatccgctggaacacggactgctgttcgagaggttcctcaac
cccgaacgtgtgaacccgcccgacatcgacctcgacttcgacgaccgccagcgtgacaag
gtcatcgattacgtcacccacaagtacggggcggagtacaccagccaggtcaacaccttc
ggcaagatcaaggccaaggctgccgtcaaggatgccaaccgtattctcggctacccattc
gctctcggcgacaagatcaccaaggcgatgcccccggatgtcatgggcaagggagttccg
ctgggcaagatcttcgatccgtcccatgagaggtacggcgagggccaggaattccgccag
ttggtttctgacaacgccgacgtcgccaaggtcgtcgagacggcgaagggcctcgagggg
ttgattcgcggaactggtgtgcacgcatgtgccttcatcctgtccagcgctccgctgctc
gacctggtgccgatgcacaagcgcgacaaggacggcatgatcatcgccggcttcgcctac
ccccagctcgaggagatggggctcatgaagatggacttcttgggcctgcgaaacctcggc
atcatggatcattgcatcaagatcatcaaggagaaccgggggatcgacgtcgatctcaag
gagcttgcccttgatgacgagaacacctacgagatgctggcccgaggcgacaccctgggc
gtcttccagctcgatggcacggccatgcgatccctgctgcgtctcatgggaccaacctgc
ttcgatgacatcgttgccgtgttggccctgtaccgaccaggcccgatgggtgccaatgcg
cacatctcatatgcccagcgcaagaacaaccgagaaccgatcatcccgatccatcccgaa
ctcaaggaggacctcgacgagatccttgctcccacgtaccacctcatcgtgtaccaggag
cagatcatgtcgatcgcccggaagctcgctggctacaccctgggtggcgcggaccttctg
cgtcgtgccatgggcaagaagaagaagcacatcctggaggagaacttcatccccttccag
gctggcatgcgtgaacacgggtactccgacgacgccatccagaccctgtgggacgtcatg
gtccccttcgccggatacgccttcaacaagtctcacgctgccggttatggactggtctcc
tactggacggcctatctcaaggccaactacccggccgagtacggagctgccctgctgacc
agtgtcggtgacgacaaggacaagatggcgatgtacctggccgacatgcggtcccagcac
atcaatgtcctgcctcccgacgtcaacgcctcctcgctggagttcaccgctgtcggtgag
gacatcagattcggcctgggagctgtccgcaatgtcggtgccaacgccgtcgcggagatc
attcgggcccgtgaggagaacggcccggccactgatttcttcagcttccttgaccaggtc
agcctgacggtgtgcaacaagaggctcatcgagtccctcatcaaggctggcgccttcgac
tccatgggccattcccgacgcggcctgatggcggtctacgagcaggcggtcgatgccgtc
atcgacatcaaacgccaccaggccaatggtcaggatgacctcttcggcatgggggacgac
tcggaacccacccagctgggtgtcgagcgggtcgttccggaggacgactgggaccgcagt
accaagctcgccttcgagcgtgagatgttgggtctgtacgtctccgatcacccgctgcga
ggcctggaagctgctctggaggccgaatcagacatctcggtggccgaactcgtcaaccct
gaaggccatcatgaggggcgctacaccatcgccggtatggtcactcagatcgtccgacgt
accaccaagaacggtgacatctgggcctctatcacgctggaggacctcggcgcctccatc
actattgcctgtttcccgaaggtgtaccagcgcgtggagccgctactggccgtcgacagc
atcctcaaggtgcgcggattcatcagggaacgtgacgagaccgtcgagatgtcagccaat
gacgtctggctgctggacctcaccgatgccggcaatgcccccatgacgattgatctacgt
cgcggacgatgcaaccggggcaccatcgagggcctgcggggagtgctgcgcaaccacccg
ggtagctccgaggtgagactgcgactcctcgacggaaaggtgacgaccaccttccggctt
gccgatgaactcaaagtcaccactggccagccgctaatggccgacctcaaggccctgctc
ggcccctcatgcatccccaggaggcagtcatga

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