KEGG   Limnobaculum zhutongyuii: EKN56_01630
Entry
EKN56_01630       CDS       T06157                                 
Name
(GenBank) RNA chaperone Hfq
  KO
K03666  host factor-I protein
Organism
prag  Limnobaculum zhutongyuii
Pathway
prag02024  Quorum sensing
prag03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:prag00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    EKN56_01630
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    EKN56_01630
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:prag03019]
    EKN56_01630
   03036 Chromosome and associated proteins [BR:prag03036]
    EKN56_01630
Messenger RNA biogenesis [BR:prag03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     EKN56_01630
Chromosome and associated proteins [BR:prag03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    EKN56_01630
SSDB
Motif
Pfam: Hfq LSM
Other DBs
NCBI-ProteinID: QBH95217
UniProt: A0A411WGV8
Position
441417..441707
AA seq 96 aa
MAKGQSLQDPFLNALRRERVPVSIYLVNGIKLQGQIESFDQFVILLKNTVSQMVYKHAIS
TVVPSRPVSHHSNAPTGSVGNYQGGMQSQQEDDVSE
NT seq 291 nt   +upstreamnt  +downstreamnt
atggctaaggggcaatctttacaagacccgtttttaaacgcactgcggcgtgaacgtgtt
ccagtttctatttatctggtaaacggtattaagttacaaggccaaatcgaatctttcgat
caattcgttatcctgttgaaaaatacggttagccaaatggtttataagcacgctatctct
acggtagttccttctcgtccagtttcgcatcatagcaatgcgccaactggaagcgtgggt
aattaccagggtggtatgcagtcacaacaggaagatgatgtatctgaataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

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