KEGG   Limnobaculum zhutongyuii: EKN56_07250
Entry
EKN56_07250       CDS       T06157                                 
Symbol
tssC
Name
(GenBank) type VI secretion system contractile sheath large subunit
  KO
K11900  type VI secretion system protein ImpC
Organism
prag  Limnobaculum zhutongyuii
Brite
KEGG Orthology (KO) [BR:prag00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:prag02044]
    EKN56_07250 (tssC)
Secretion system [BR:prag02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   EKN56_07250 (tssC)
SSDB
Motif
Pfam: VipB VipB_2 SPX
Other DBs
NCBI-ProteinID: QBH96212
UniProt: A0A411WJ52
Position
1655937..1657475
AA seq 512 aa
MSTSTQGSSSKTASTVVKDASSVYQSLFDKINLTPVAQFDDIVKFQDNDALAEASADERV
TMAVNVFLNMVQQSAQKVDKLDKSLLDFHISQIDKQLSEQLDAVMHHPEFQSIESAWRGL
KFLVDRTDFRRNVRIEVLDASKEALQQDFEDAPETIQTGFYRHTYIQEYDTPGGEPIGVT
ISNFEFDRGPQDIALLRNISKVAAAAHMPFIASVGPAFFGKNNMEEVAAIKDIANYFDRA
EYTKWKSFRDTDDSRYVGLTLPRVLARLPYGPDTVPVRNFNYTEEVKGPDHDRYLWTNAS
FAFAANMVKSFVRNGWCVQVRGPQAGGLVDDLPIHLYDLGTGNQVKIPTEVLIPETREFE
FANLGFIPLSFYKNRDYACFFSANSAQKPALYDTKEATANSRINARLPYIFLLSRIAHYL
KVIQRENIGATKDRRVLELELNAWINNLVTEMTDPSDEVQASHPLRQAKVIVEDIDDNPG
FFRVKTFLIPHFQIEGMDINLSMVSQMPKAKA
NT seq 1539 nt   +upstreamnt  +downstreamnt
atgtctacctctacacaaggttccagttctaaaactgccagcactgtagtgaaagatgcc
agcagcgtctatcagtctctgtttgataaaattaatctcactccggttgctcaatttgac
gatatcgttaagtttcaggataacgatgcgctggcggaagcctctgctgatgaacgtgtc
actatggcggttaacgtatttctgaatatggttcagcaatcggcgcaaaaagtggataag
ctggataagagcctgctggatttccatatcagccaaatcgacaaacagttgagcgagcag
ttagatgccgtgatgcatcatcccgaatttcaatctatcgagtcggcatggcgcggctta
aagttcctggttgaccgtactgacttccgtcgcaatgtcagaatcgaagtgctggatgct
tcaaaagaagcactgcagcaagatttcgaagatgcaccagaaaccattcaaaccggcttt
tatcgtcatacctatattcaggaatatgacaccccaggcggtgagccaattggcgtaacc
atttctaactttgagtttgatcgtggtccgcaggatatcgcattactgcgtaatatctct
aaagtggcggcagcggcacacatgccgtttattgcctctgttggcccggctttctttggt
aagaacaacatggaagaagtggcagcaattaaagatattgctaactacttcgatcgtgct
gaatacaccaagtggaaaagcttccgcgataccgatgattcccgctatgtgggtttaacc
ctgccgcgcgtattggcgcgtctgccatatggtccggatacggtaccggtgcgtaacttc
aactataccgaagaggtaaaaggaccggatcacgaccgttatctgtggaccaatgcctca
tttgcttttgctgccaatatggtgaaaagctttgtgcgtaacggttggtgtgttcaggtt
cgtggcccgcaggctggcggtttagttgacgatctgccaattcatttgtacgacctggga
actggcaatcaggttaagatcccaacggaagttctgatcccggaaacccgtgagtttgaa
tttgctaacctgggctttatcccactgtcattctataaaaaccgtgactatgcgtgcttc
ttctctgctaactcagcccagaaaccagcgctgtatgacaccaaagaagccactgcgaac
agccgaatcaatgcccgtttaccgtacattttcctgctgtcacgtattgctcattacctg
aaagtgattcagcgcgagaacattggtgcgactaaagatcgtcgtgtgctggagctggag
ctgaatgcctggatcaataatctggtcaccgaaatgaccgatccaagcgatgaagttcag
gcgtcacatccgctgcgtcaggcaaaagttatcgtagaagatattgacgataacccgggc
ttcttccgggtgaaaacattccttattcctcacttccagattgaaggcatggacatcaat
ttatcgatggtttctcaaatgccaaaggccaaggcttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (9)   

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