KEGG   Limnobaculum zhutongyuii: EKN56_16810
Entry
EKN56_16810       CDS       T06157                                 
Name
(GenBank) signal recognition particle protein
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
prag  Limnobaculum zhutongyuii
Pathway
prag02024  Quorum sensing
prag03060  Protein export
prag03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:prag00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    EKN56_16810
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    EKN56_16810
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    EKN56_16810
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:prag02044]
    EKN56_16810
Enzymes [BR:prag01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     EKN56_16810
Secretion system [BR:prag02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   EKN56_16810
  Eukaryotic Sec-SRP protein
   EKN56_16810
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N CbiA Zeta_toxin AAA_22 cobW AAA_31 AAA_30 AAA_24 AAA_33 YqeC KTI12 AAA_14 Helicase_RecD APS_kinase AAA_16 AAA_19 T2SSE ArsA_ATPase NACHT Thymidylate_kin AAA_17 DO-GTPase1 TsaE KAP_NTPase GlnD_UR_UTase ResIII 6PF2K Rad17 VirC1 Mg_chelatase ATP_bind_1 Fe-ADH_2 ATPase_2 NTPase_1 SLFN-g3_helicase
Other DBs
NCBI-ProteinID: QBH97913
UniProt: A0A411WNU6
Position
complement(3771544..3772902)
AA seq 452 aa
MFENLTDRLSRTLRNISGRGRLTEENIKDTLREVRMALLEADVALPVVRDFINKVKESAV
GQEVNKSLTPGQEFVKIVRNELVAAMGEENNSLNLAAQPPAVILMAGLQGAGKTTSVAKL
AKFLKEKQKKKVLVVSADVYRPAAIRQLETLAEAISVDFFPSDAQEKPVDIVNNALKQAK
LKFYDVLIVDTAGRLHVDEAMMDEIKQVHAAINPVETLFVVDAMTGQDAANTAKAFNEAL
PLTGVVLTKVDGDARGGAALSIRHITGKPIKFLGIGEKTEALEPFHPDRVASRILGMGDM
LSLIEDLESKVDREQAEKLANKLKKGDGFDLTDFLDQLKQMRNMGGMASMMSKLPGAGQI
PDNVKAQMDDKLLVRMEAIINSMTLKERASPEIIKGSRKRRIATGSGMQVQDVNRLLKQF
DDMQRMMKKMKKGGLAKMMRGMKGMMPPGMMR
NT seq 1359 nt   +upstreamnt  +downstreamnt
atgtttgaaaacttaaccgatagattgtcgcgcacgttgcgcaacatcagtggccgtggg
cgactgaccgaagaaaatattaaagatacactgcgtgaagtccgtatggcgctgctggaa
gccgacgtagctttaccggtggttcgtgatttcatcaataaagtcaaagagagcgccgtt
gggcaggaagttaataagagcctgaccccaggacaagagttcgtcaaaattgttcgtaac
gaactggttgctgcaatgggagaggaaaataacagcctcaacttggccgctcagccaccg
gcagtaatattaatggcgggtttgcaaggggcgggtaaaactaccagcgttgccaaactg
gctaaattcctgaaagaaaaacagaagaaaaaagtgctggtcgtttctgccgacgtttac
cgtccggcggcaatccgtcagttagaaacgctggcggaagccattagcgttgatttcttc
ccatccgacgctcaggaaaaaccggttgatatcgttaacaatgcgttaaagcaagccaaa
cttaagttctatgacgttctgattgtcgataccgccggtcgcttacacgtcgatgaagcg
atgatggacgaaatcaaacaggttcatgccgcgattaatccggtagaaacgctgtttgtg
gttgatgctatgaccggtcaggatgcagctaatacggcaaaagcctttaatgaagcactg
ccattaaccggtgtagtactgaccaaagtcgatggtgatgcacgtggtggtgcggcactt
tctattcgccatattaccggtaaaccaattaagttcctgggtattggcgagaagactgaa
gcgctggagcctttccatccggatcgcgtagcatcacgtattctgggcatgggtgatatg
ctctctttgatcgaagatcttgagagtaaagttgaccgcgagcaagcagaaaagctggcg
aataaactgaagaaaggcgatggttttgacctgaccgatttcctcgatcagcttaagcaa
atgcgcaacatgggcggaatggccagcatgatgagcaaattgcccggcgcaggccagatt
cctgataacgttaaagcacagatggatgataaattgctggtgcgtatggaggcgattatt
aactccatgacgttaaaagaacgtgccagtccggaaatcatcaaaggttcacgtaaacgc
cgtattgctacgggttcgggtatgcaggtgcaggatgttaaccgcctactgaaacagttc
gacgatatgcagcgtatgatgaaaaagatgaagaagggcggattagcgaaaatgatgcgc
ggtatgaaaggtatgatgcctccgggtatgatgcgttaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (37)   
   Pfam (37)   
All databases (48)   

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