KEGG   Pieris rapae (cabbage white): 110994229
Entry
110994229         CDS       T05162                                 
Name
(RefSeq) transcription initiation factor IIB
  KO
K03124  transcription initiation factor TFIIB
Organism
prap  Pieris rapae (cabbage white)
Pathway
prap03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:prap00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    110994229
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:prap03021]
    110994229
Transcription machinery [BR:prap03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIB
     110994229
 Prokaryotic type
  Archaeal type
    TFB
     110994229
SSDB
Motif
Pfam: TFIIB TF_Zn_Ribbon Cyclin_N Cyclin_C RB_B Sigma70_r4 BING4CT
Other DBs
NCBI-GeneID: 110994229
NCBI-ProteinID: XP_022116458
Position
10:4466298..4470229
AA seq 315 aa
MASTSRIEANKVVCYAHPDAPLIEDYRAGDMICSECGLVVGDRVIDVGSEWRTFSNEKSG
VDPSRVGGPENPLLSGGDLSTIIGPGRGDASFDSFGVSKYQNRRNISSTDRALINAFREI
NTMADRINLPKTIVDRANNLFKQVHDGKNLKGRANDAIASACLYIACRQEGVPRTFKEIC
AVSKISKKEIGRCFKLILKALETSVDLITTADFMSRFCSNLGLPNSVQRAATHIARKAGE
LDIVSGRSPISVAAAAIYMASQASEDKRSQKEIGDIAGVADVTIRQSYKLMYPYASKLFP
DDFKFATPIEFLPQM
NT seq 948 nt   +upstreamnt  +downstreamnt
atggcgagcacgtcgagaatcgaggcgaataaagtggtgtgttatgctcacccagatgct
ccgcttattgaggattatcgagcgggtgacatgatatgctctgaatgcggtctcgttgtt
ggtgacagagttatagatgtgggttcagaatggcgtacattcagcaatgaaaaatcaggt
gttgatccatctcgtgttggtggacctgaaaatcctcttctttctggtggtgatttgtcc
actataattggtcctggccggggcgatgcttcatttgacagttttggagtgtcaaagtat
caaaacagaaggaacattagcagtactgacagagcattaataaatgcctttagagaaata
aataccatggcggatcggataaacttgccaaagactattgttgacagagcaaataattta
tttaaacaggtgcatgatggtaaaaacttgaaaggcagagcaaatgatgcaatagcatct
gcttgcctctatatagcatgtcggcaagagggagtgcctcgtacgttcaaggaaatatgt
gcagtgagcaaaatcagcaaaaaagaaattgggcgatgcttcaaattgatattgaaggcg
ctagagacatcagtggatcttattacaacagctgatttcatgtctcgattctgttccaat
cttggactaccgaactctgttcaacgagcggccacacatattgcgaggaaagctggggag
ctggatattgtgtctggaagaagtcctatatcggtggctgctgctgcaatttatatggcg
tcacaggcatctgaggacaagcgaagccaaaaagaaatcggtgacatcgctggtgtggca
gacgtaactataagacagtcttacaaacttatgtacccttacgcaagtaaattattccca
gatgacttcaaattcgcaacaccaattgagttccttccgcaaatgtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (44)   
   KEGG ORTHOLOGY (1)   
   RefGene (40)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (57)   

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