KEGG   Pandoraea pnomenusa: X636_04810Help
Entry
X636_04810        CDS       T02950                                 

Definition
(GenBank) exodeoxyribonuclease V subunit gamma
  KO
K03583  exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
Organism
prb  Pandoraea pnomenusa
Pathway
prb03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:prb00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    X636_04810
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:prb03400]
    X636_04810
Enzymes [BR:prb01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     X636_04810
DNA repair and recombination proteins [BR:prb03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     X636_04810
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: Exonuc_V_gamma RecC_C
Motif
Other DBs
NCBI-ProteinID: AHB74828
Position
complement(4136425..4139841)
Genome map
AA seq 1138 aa AA seqDB search
MLHLFFSNRFTTLEAALLRDLAQAPGQGDAAANPFDTETIVVPSVAVRRRLELDYADIFG
VCANVRLTYLAQWLWDMAGKLLTVPESSPFAPDRLVWPLYQCLAQPWVRSSPRLAGYLAG
ADDVMRFELAERLAHIYDQYLTYRPNWLERWQAGEPIDAGTAPGWGQVQRDDEAWQSALW
RKVLAHLDIRERHPTLRAIDRIEQLTPETVPHGWPRRVSVFALSSMPPLSMALLKAMSRL
IDVHLYVLNPCESYWFDIVPPSRLSYLTRRDGAAHREVGHPLLAEWGRQTQSHIDALYAD
LAPQAVEDRALFQPNPAPTLLAALQNGILTLDDGRHGTTQGGGADGSVQVHVCHSLARQI
EVLHDRLLACFDEIPDLRPDDVLITVPDLARAAPLIDAVFGTATPRIPYLVTGLPPTRTN
PVARAFASILALPQQRVAASSLVELARTEAVAQRYDLGGNVLDAIQNWLHAAGARRGWRG
DALLRLEAPRQAADGDGEMAPALERHTLGDAMMRLFLGYALPDDALPVDDWLPVGGIEGG
RAELLGQLARLIDDLDMTSVALRTERTGLEWRDQLLAMLEQFFSDETRFADDVAEVRMAI
EQIGSAIADGAPEVRVPVEVVARVLADALDDPTRGGVPSGRVTFAAIPSLRLLPYRVVCM
IGMDDGVLPGRVRADEFDLMRVLPQRGDRQRRDDERNLFLDLMLSAQDRFLITYTGRSVR
DNAPLPPSTAVDELLDFTGQLLAPVSAGYTLEAQREARDALIVLHPLQPFSPAYFDGRDA
SLFSYDVSNGDAARALADPLAVPASDVPEAPFVREALPAVAQTHLTLDDLLRFWRHPGRA
WARDRLGLSLGEMLTEVEDDEPFVLDWAGRDALASRLLPRLLRDDARDARHHAEAVERIA
RVSHELPGGATGAVWRRRELGGLRALAAQVREAQAEGTQELLVALPLTPALPPSWKASTP
AAWHGDATLSAQCLLQGRLAPVSRYGLVMYRYGSMRPSDLLAAWLAHLALCAHLQQSAHA
GLDVAPRTLWYGENETFALRPVEDAAALLAQWVALYRLGQTRPLPFFARSAWKLASTGKA
AEAESAWQGSAFARGDADDPYTRLLWRGVENPLAPPFDLLANTVFGPVVQHLEVVEGA
NT seq 3417 nt NT seq  +upstreamnt  +downstreamnt
atgctccacctattcttttccaaccggttcaccacgctcgaagccgccttgctgcgcgat
ctcgcgcaagcgcccggccagggcgacgccgccgcgaatcccttcgacacggaaaccatc
gtcgtgccgagcgtggcggtgcggcgtcggctcgaactggactacgcggacatcttcggc
gtatgcgcgaacgtccggctgacctacctcgcccagtggctctgggacatggcgggcaag
ctgctcacggtgccggagagttcgccgttcgcgccggaccggctcgtctggccgctgtac
cagtgcctggcccagccgtgggtcaggagctcgccgcgtttggccggctatctggccggc
gccgacgatgtcatgcgcttcgaactggcggagcgtctggcgcacatctacgaccagtat
ctgacctatcggccgaactggctcgagcgttggcaggccggcgagcccatcgatgccggc
acggcgccgggctgggggcaggtgcagcgtgacgacgaagcgtggcagagcgcgttgtgg
cgaaaggtgctggcgcatctggacatccgcgagcgtcatcccacgctccgggcgatcgac
cggatcgaacaactgacaccggaaacggtgccccatggctggcccaggcgtgtgtcggtg
ttcgcactgtcgtcgatgccgccgttgtcgatggcgctgctcaaggcgatgtctcgcctg
atcgacgtccatctgtacgtcctcaatccgtgcgagagctattggttcgacatcgtcccg
ccgtcgcgtctgtcgtatctcacgcgccgcgatggcgcggcgcaccgggaggtggggcat
ccgttgctggccgagtggggtcgccagacgcagtcccacatcgacgcgctgtatgccgat
ctcgcgccacaggcggtcgaggaccgggcgctgttccaacccaatcctgccccgacgctg
ctcgccgccttgcagaacggcatcctcacgctggacgacggccgtcacggcaccacgcag
gggggcggcgccgatggttcggtgcaggtgcatgtgtgccacagtctggcgcgccagatc
gaggtgcttcacgaccggctgcttgcctgcttcgacgaaattcccgatctgcggcccgac
gacgtgctgatcaccgtgcccgatctggcgcgcgcggcgccgctcatcgacgccgtattc
gggaccgccacgcctcgcattccctatctcgtgacgggcctgccgcccacgcgcaccaat
ccggtcgcgcgcgccttcgcttccatactggcattgccgcagcagcgggtggcggcatcg
agtctcgtggaactggcgcgcacggaagccgtggcgcaacgctatgacctcgggggcaat
gtgctcgatgccatccagaactggctgcacgccgccggcgcacgtcgcggctggcgcggc
gacgcgctgctgcggctggaggcaccgcggcaggccgcagacggcgacggggagatggcg
cccgcgctggagcgtcatacgttgggagacgccatgatgcggctgttcctcggctatgcg
ctgccggatgacgccttgccggtcgacgactggctgccggtcggcggtatcgagggcggt
cgtgccgagttgcttggccagctggcgcgtctgatcgacgatctcgacatgacgtccgtt
gcgctgcggacggagcgcacggggcttgagtggcgcgatcagttgctcgcgatgctggag
cagttcttctccgacgagacgcgcttcgccgacgacgtggccgaggtgcgcatggcaatc
gagcagatcggttcggccattgccgacggtgcaccggaggttcgcgtgccggttgaagtg
gtcgcccgcgtgctggccgacgccctcgacgatcccacgcgcggcggcgtgccctcgggg
cgcgtgacgtttgccgccatcccgagcctgcgtctcttgccgtaccgcgtggtgtgcatg
atcggcatggacgacggtgtgcttccggggcgcgtacgcgccgacgagttcgacctgatg
cgcgtgttgccgcagcgaggcgatcgtcaacgacgcgacgacgagcgcaacctcttcctc
gacctgatgctcagcgcccaggatcgttttctcatcacctacaccgggcgcagcgtgcgc
gacaacgcaccgctgccgccctcgaccgcggtcgacgaactgctcgatttcacgggacag
ttgcttgccccggtatccgcggggtacacgctcgaggcacagcgcgaggcgcgcgacgcc
ctgatcgtgctgcatccgttgcaaccgttttccccggcatatttcgacggtcgcgacgcg
tcgctcttcagctacgacgtgtccaacggcgacgccgcgcgggcgttggccgaccccctg
gccgtgcccgcatcagacgtccccgaggcgcccttcgtgcgagaagcgctgcccgccgtg
gcgcagacgcatctgacgctcgacgacctgctccgcttctggcggcatcccggccgtgcg
tgggcaagggacagactgggactgtcgcttggggagatgctcaccgaagtggaggacgac
gagccgttcgtgctggattgggcgggccgcgatgcgctggcgtccaggctgctgccgcga
ttgctgcgcgacgatgcacgcgacgcccgccatcatgccgaagccgtcgagcgaatcgcc
cgcgtgagtcatgagttgccgggcggcgcgacaggcgcggtctggcgccggcgcgagctg
ggtggcttgcgcgcgctcgcggcgcaggtgcgcgaggcccaggccgaagggacgcaggag
ctattggtggccctgccgttgacgccggcactgccgccgtcgtggaaggcatcgacgccg
gccgcatggcacggtgacgcgaccttgtcggcgcagtgtctgttgcaaggacggctcgca
ccggtttcgcgttacgggctggtgatgtatcgctatggcagcatgcgtccaagcgatctg
ctcgccgcgtggctggcgcatcttgccttgtgtgcgcatttgcagcagagcgcgcatgcc
ggtctggatgtggcgccaagaacgttgtggtacggcgagaacgagacgttcgcccttcgt
cccgtggaagacgcggcggcgttgctcgcccaatgggtggcgttgtaccggctgggccag
acgcgtccgctaccgtttttcgcacgcagcgcgtggaagctggcgagcaccggcaaggcc
gcagaggccgagagcgcctggcagggttcggcgttcgcacgcggtgatgccgacgatcct
tacacgcggctactttggcgcggcgtggagaatcccttggcgccgcccttcgatctgctt
gcgaataccgtgttcgggccggtggttcaacatctcgaagtcgtggagggcgcatga

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