KEGG   Pradoshia sp. D12: F7984_12270
Entry
F7984_12270       CDS       T06218                                 
Name
(GenBank) restriction endonuclease subunit R
  KO
K01156  type III restriction enzyme [EC:3.1.21.5]
Organism
prd  Pradoshia sp. D12
Brite
KEGG Orthology (KO) [BR:prd00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:prd02048]
    F7984_12270
Enzymes [BR:prd01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.5  type III site-specific deoxyribonuclease
     F7984_12270
Prokaryotic defense system [BR:prd02048]
 Restriction and modification system (R-M system)
  Type III R-M system
   F7984_12270
SSDB
Motif
Pfam: RE_endonuc ResIII DEAD PhoH RNA_pol_L
Other DBs
NCBI-ProteinID: QFK71947
UniProt: A0A5J6XP88
Position
complement(2556759..2559713)
AA seq 984 aa
MKIQFDELTYQADAINAVLGVFEGQQIRKSEFTIMNEDIQGKLFGEKGIGNKIDVSESKL
LQNVQQLQIKKGIPIAQSIPSPFPQFNIEMETGTGKTFVYLKSILEMNRKYGFTKFIIVV
PSVAIKEGVMKTLQMTKEYFKTQMQGIVYREFMYDSSKLENIIAFASNENVEIMVINIQA
FNSEDNIFNRNDRDKLYGISPKDYIAETNPIVVIDEPQSVDNTENAKAAIISLNPSFVFR
FSATHKEEGYPLLYKLGPVEAYQNKLVKQIEVAGVKRTIDGNEAYLRLLGIKATKTSVTA
SVEILEKKKTGIAKKVISLKKNDDLAKKTKLTAYEEIGYVRDISAEKDNEYIEFSGEPSV
IYLSQAHHADLEVKRGQIRKTIEEHLNKELKLNTLGIKVLSLFFIDNVANYRKYDEEGNP
YLGKYGQIFEEEYKDVLKSPKYKKLRDYHIPVEEVHNGYFSIDKKGKFKNGGEKDESAFH
IIMKDKEDLLTMYDVEKKKMKKAHKLRFIFSHSALKEGWDNPNVFQICTLIDSKDELTKR
QKIGRGLRIAVNQSGDRVYGFKVNTLTVMANESYEEFAADLQHEYEKDGMEFGIFKNETF
SSLVLEVDELTGYQKPLGREYSKKLVEYLTEQKYIDAKGKGTVALAKAIKDQVFELPEEY
AVLAPDMTKKVIAAIEQKFNTEKIEIKDHAKKETVRLNKEALSGSFLELWERIKYKTTYS
IQFDSEQFISDAAKKLKDELLVRIQKLEYERKQLKIEESGIEEKTTEKTSFSTVQREYTK
APDILTELQQDTKLTRKTLIAILKQSDTLHDFKVNPQMYMLEAARIINAAKRLAMVDGVK
YEKLETEEVYDQSLFKQEEIESYEDSIVKVSDNRSPYDHVIVDSKIERDFAEACEKDPNV
KFYIKLPADFKIKTPLGNYNPDWALSVEEDGKEKLYFIVETKGSTAAEDLRKTELEKIRC
GEKHFAAINTGITFKRAVELEQVY
NT seq 2955 nt   +upstreamnt  +downstreamnt
atgaaaattcaatttgatgaattaacatatcaggcagacgcgataaatgcagtattagga
gtatttgaagggcaacaaattcgcaaatcagaatttacgattatgaatgaagatatacag
gggaaactatttggtgaaaaaggtatcggaaataaaattgatgtatcagaaagtaaactt
ctacaaaacgtgcaacagttgcaaattaagaaaggtattccaattgcccaatcaattcca
tcgccttttccacaattcaatatcgaaatggaaacaggaactgggaaaaccttcgtttat
ttaaaatcgattttggaaatgaaccgcaaatatggctttactaaatttattattgttgtt
ccttcggtagcaattaaagaaggcgtaatgaaaacgctgcaaatgacgaaagaatatttt
aaaacgcaaatgcaaggaattgtttatcgtgaatttatgtatgatagttctaagttagag
aatataatagcatttgcttcaaatgaaaatgtagagattatggttattaatattcaagca
tttaatagtgaagataatattttcaaccgtaatgatcgcgataaattatatggcatttcg
cctaaggattatatcgcagaaacgaatccgattgttgtgattgacgagccgcaaagcgta
gataatactgagaacgctaaggcggcgattatttctttaaatccatcgtttgttttccgt
ttctctgcaacgcataaagaagaaggttatcctttactttataaattaggaccagttgaa
gcttatcagaataagttagtaaagcaaatcgaagtggctggtgttaaacgtacaattgat
ggcaatgaggcttacttacgattattaggtattaaagcgacaaagacttctgttacagca
tcggtagagattttagaaaagaagaaaacaggtatcgcgaaaaaagttatttcgttaaag
aaaaacgatgatttagctaaaaagacaaaattaacagcgtatgaagaaataggttatgtt
cgtgatatatcagctgaaaaagataatgaatacattgagttttcaggcgagccatctgta
atttatttaagccaagcacaccacgccgacttagaggtaaagcgcggtcaaattcgtaaa
acaattgaggaacacttaaataaagagctaaagctaaatactttaggaattaaagtgtta
agtctattctttatcgataatgtagcaaactaccggaaatacgatgaagaaggtaatcct
tatttagggaaatatggtcaaatttttgaagaagagtataaggatgtattaaaatctcct
aaatataaaaagcttcgtgattaccatatccctgttgaagaagtgcataatggatacttc
tcgattgataaaaaaggtaaatttaaaaatggtggggaaaaggatgaaagtgccttccat
atcatcatgaaagataaagaagatttactgacgatgtatgatgtagaaaaaaagaaaatg
aaaaaagcacataaattgcgctttatattttcgcattcagctttaaaggaaggctgggac
aacccaaacgtcttccaaatttgtacactaattgattcgaaagatgaacttacaaagcgt
caaaagatcggtcgtggtctccgcatagccgttaatcaaagtggtgaccgtgtatatgga
ttcaaggtaaatacattaacagtgatggcaaacgaaagctacgaagaatttgctgccgac
ttacagcatgaatacgaaaaagatggcatggagttcggtatttttaagaatgaaacattt
agttcgcttgtgttagaggtagacgagttaacgggataccaaaaacctttaggtcgtgaa
tattcaaaaaagcttgttgaatatttaacagagcaaaaatacattgatgcaaaagggaaa
ggaaccgttgccttagcgaaagcaattaaagatcaagtatttgaactgcctgaagaatat
gctgtacttgcaccagatatgacgaaaaaagtcatcgctgcgattgaacagaagtttaat
acagaaaaaatcgagattaaggatcatgcgaaaaaagaaacggttcgattaaataaagaa
gcgttatctgggtcattccttgagctgtgggagcgcattaaatataaaacaacgtactcg
attcaatttgatagtgaacaattcatcagcgatgcggccaaaaaactaaaggatgaactg
ttagtgcgtattcaaaaattagaatacgagcgtaagcagttaaaaattgaagaaagtggt
attgaagaaaaaacgacagaaaaaacaagtttcagtactgttcaacgtgaatatacaaaa
gcacctgatattttaacggagttacagcaagatacgaaactaactcgtaaaacattaatt
gcgattttaaagcagagtgatacattgcatgattttaaagtgaatccacaaatgtatatg
ctagaagccgcgcgcattattaatgcagctaaacgtttagcaatggtggatggcgttaaa
tacgagaaattggaaacagaagaagtatacgatcaaagcttattcaaacaagaagaaatt
gaatcgtatgaagatagcattgtgaaagtttcagacaaccgttcgccttatgaccatgtt
attgtagattccaaaattgaaagagattttgctgaagcatgtgaaaaagatccaaatgta
aagttttatattaaactgcctgcagactttaaaattaaaacgccgcttggaaactataat
cctgactgggcattatctgttgaagaagacggcaaagagaaactgtactttattgttgag
acaaaaggaagtacagctgcagaagatttacgcaaaacagaattagaaaaaattcgttgt
ggagaaaagcacttcgcagcaattaatacaggtatcacattcaagcgagccgtagaacta
gagcaagtatattaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (13)   

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