KEGG   Poecilia reticulata (guppy): 103458771
Entry
103458771         CDS       T05149                                 
Symbol
pnn
Name
(RefSeq) pinin
  KO
K13114  pinin
Organism
pret  Poecilia reticulata (guppy)
Pathway
pret03013  Nucleocytoplasmic transport
pret03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:pret00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    103458771 (pnn)
   03015 mRNA surveillance pathway
    103458771 (pnn)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pret03019]
    103458771 (pnn)
   03041 Spliceosome [BR:pret03041]
    103458771 (pnn)
Messenger RNA biogenesis [BR:pret03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     103458771 (pnn)
Spliceosome [BR:pret03041]
 Complex C
  Other components
   EJC/TREX
    103458771 (pnn)
SSDB
Motif
Pfam: Pinin_SDK_N Pinin_SDK_memA
Other DBs
NCBI-GeneID: 103458771
NCBI-ProteinID: XP_008398038
UniProt: A0A3P9NNW7
Position
LG22:18111837..18117906
AA seq 669 aa
MAVAVRSLQDQLEKAKESLKNVDDNIRKLTGRDPNESRPGQLRRLSGPMVGLGGGRGRGI
NILRRSLSDMGSGGTPAKQRDIEGALLRLAGDQRARRDVRHDSDAEDDDDVKKPALQSSV
VATSKERTRRDLIQDQTMDEKGKQRNRRMFGLLMGTLQKFKQESNVSSEKLKRRSEIEQK
LEVQAEAERKKVENEKRELFEERKAKQTELRLLEQKVELAQLQEEWNCHNNHLVKYIRTK
TKPHIFYRPGKMCSATQKLLEESTKKLNAVFEERREAFAEHLSKMESRPRRQPNRDQDGS
SASRMDRPAEGKPAGQVEKRRGKRGESRREEDEDEDEDDEEEREKESDRKEAGGGDGEEG
EKEGLVKIEEVEEEVMEVREKGSKEDAGEEQEKSEKAASPESEEMEVEKEDKGKEDEVET
DRKQESTEIQEEKTPDVQSCEAAVSSVEVPDSSEEPPQSLVAGEPAARSPGTETASPSQE
PQTASAAPTQDPTSPAQDSMAPESSVQDSTVENQTEERKSQEDEGPQKLPDSKEVDAPAK
EGGEEKGRGRKKGKDAKKRRSRSNSSSSSSSGSSSSGSSSSSSGSSRSSSSSSSSSSSTS
SSRSRDGGKRKRRPSDRGRDKKKEEKSRQKSGGRDSAERRKRRSEEKKGRPSRSDREHKD
RGDRKDKRR
NT seq 2010 nt   +upstreamnt  +downstreamnt
atggcggtggctgtgcggagcttgcaggaccagctcgaaaaagccaaagaaagcttgaaa
aatgtggacgataatattcgtaaactgaccgggcgggaccctaatgaatcacgaccgggt
cagctgcgtcggctcagtggccccatggtaggcctgggaggaggtagaggaagaggaata
aatatcctcagacgcagtctctcagatatgggaagcggcggaacccctgccaagcaaagg
gacatcgaaggagctctgctgaggctggcaggtgatcagagggccaggagagacgtgcgt
catgacagtgacgccgaggacgatgacgatgtcaaaaaaccggcgttacagtcgtctgta
gtagctacctccaaggagagaacacgccgagacctcattcaggatcaaaccatggatgaa
aaggggaaacagaggaatcggcgcatgtttggcctgctgatggggacactgcagaaattc
aagcaagaatcgaacgtctcatctgagaagctaaagcgacgttcagagatagagcagaag
ctcgaggttcaagctgaggctgagaggaaaaaagtggagaatgaaaagcgagaactgttc
gaggagagaaaagccaagcagacagagctgagactgctggaacagaaagtagaattagct
cagctgcaagaggagtggaactgccacaacaatcacctggtgaaatacattcgcaccaaa
accaagcctcatatcttctaccggcctggaaaaatgtgctccgcaactcagaaactcctc
gaagaatccaccaagaaactcaatgctgtgtttgaggaaaggcgtgaggcatttgccgaa
catttgagcaagatggagtcgcgtccccggcgacagccgaaccgcgaccaggatggcagc
tcagcctcaaggatggaccgcccggcagagggtaagccagcaggtcaggtagagaagcgg
agaggtaaaaggggggagtccaggagggaggaagacgaggatgaggatgaggacgacgag
gaggaaagggagaaggagagtgacaggaaggaggcgggagggggcgatggtgaggaggga
gagaaagaggggttggttaaaatagaagaggtggaggaggaagtgatggaggtgagagag
aagggaagcaaggaggatgcaggagaggagcaggagaagagtgagaaggcagcaagtcca
gagtcagaggagatggaggtagagaaggaagacaagggtaaggaggacgaggtagaaaca
gacaggaagcaggagtccacagaaatacaagaagaaaagactccagatgttcagagctgt
gaagcagctgtaagcagcgtagaggtcccagactccagcgaagagcccccacagagcctc
gttgctggagaaccggcagcacgatcacccgggacggagaccgcctctccaagccaagaa
ccccaaacggcctccgctgcccctactcaggatccaaccagtcccgcacaggacagcatg
gctccagagtccagcgtccaggactccacagtggaaaaccagacagaggagagaaaatca
caggaggacgagggcccacaaaagttgcctgattctaaggaggttgatgcccctgcaaag
gagggaggagaggaaaaaggcagagggcgaaagaaggggaaagacgcgaagaaacgtcgc
agtcgtagcaacagctcctcctcttcctcatccggatcctcctccagtggtagttcctcc
tcatcctccggatccagccgatcctcgtcatcgtcttcgtcctcctcgtcctcgacgtcc
agcagccgcagccgagacggcggcaagcgaaagaggaggccgtccgacagaggcagggac
aagaagaaggaggagaaaagtcgacagaagtcaggagggagagactcggcggagaggagg
aagagaaggagcgaggaaaagaagggcaggccgtcccggagcgatagggagcataaagat
agaggagacaggaaggacaagagacgctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (15)   

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