KEGG   Poecilia reticulata (guppy): 103465081
Entry
103465081         CDS       T05149                                 
Symbol
rae1
Name
(RefSeq) mRNA export factor isoform X1
  KO
K14298  mRNA export factor
Organism
pret  Poecilia reticulata (guppy)
Pathway
pret03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:pret00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    103465081 (rae1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pret03019]
    103465081 (rae1)
   03036 Chromosome and associated proteins [BR:pret03036]
    103465081 (rae1)
Messenger RNA biogenesis [BR:pret03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     103465081 (rae1)
Chromosome and associated proteins [BR:pret03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    103465081 (rae1)
SSDB
Motif
Pfam: WD40 ANAPC4_WD40 NBCH_WD40 Exonuc_X-T_C
Other DBs
NCBI-GeneID: 103465081
NCBI-ProteinID: XP_008407854
UniProt: A0A3P9PRQ5
Position
LG5:15718530..15726491
AA seq 369 aa
MSLFGTASSFGTGGTGVFGSTTTDSHNPMKDVEVTSPPDDSISCLAFSPPTMPGNFLIAG
SWANDVRCWEVQDNGQTVPKAQQMHTGPVLGVCWSDDGSKVFTASCDKTAKMWDLNSNQA
MQIAQHDGPIKSIHWIKAPNYSCIMTGSWDKTLKFWDTRSPNPMMSLQMPERCYCADVVY
PMAVVATAERGLIVYQLENQPSEFRRIDSPLKHQHRCVAIFKDKQNKPTGFALGSIEGRV
AIHYINPPNPAKDNFTFKCHRSNGTNTTTPQDIYAVNAISFHPVHGTLATVGSDGRFSFW
DKDARTKLKTSEQLDQPITACCFNHNGNIFAYASSYDWSKGHEYYNPQKKNYIFLRNAAE
ELKPRNKKW
NT seq 1110 nt   +upstreamnt  +downstreamnt
atgagtttgttcggaacggcttccagctttggaacaggagggactggtgtttttggaagc
acgacaactgacagccataatcccatgaaggatgtcgaagtgacctcgcctccagatgac
agcatcagctgcctggccttcagtcctccaaccatgccaggaaacttccttattgcagga
tcctgggctaacgatgtgagatgttgggaggtgcaggacaacggacagaccgtccccaaa
gcccaacagatgcacacgggtccggtgctgggtgtctgctggagcgacgacggcagtaag
gtattcaccgcttcatgcgacaagactgccaagatgtgggatcttaacagcaaccaagcg
atgcagattgcacagcatgacggtccaatcaaatcaatccactggataaaagccccaaac
tacagctgtatcatgaccggcagctgggataaaacactgaagttttgggacacccgctcg
cccaaccccatgatgtccctgcagatgcccgagagatgctactgtgctgacgttgtgtat
cccatggcagtggtagccacagcggaaagaggccttatagtgtaccagttagagaaccag
ccttctgagtttcgcagaatagactcacctctcaaacatcagcaccgttgtgttgccata
tttaaggacaagcagaacaagccaacaggctttgcactgggaagcattgagggtagagtg
gcgatacattacatcaatccgccaaatccagccaaagataatttcaccttcaagtgccac
aggtccaatggaaccaacacaaccactccacaggacatctatgctgttaacgccatctcc
ttccatcctgtccacggcacgctggccaccgtgggctccgacggacgcttcagcttctgg
gacaaagacgcgcgcaccaagctgaagacctccgagcagcttgaccagccaatcacagct
tgctgcttcaaccacaacggcaacatcttcgcgtacgcctcgagctacgactggtcaaag
ggccatgagtactacaacccccagaaaaagaactatatctttctgaggaacgccgctgag
gagctgaagcctcggaacaagaaatggtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (4)   
   Pfam (4)   
All databases (20)   

Download RDF
DBGET integrated database retrieval system